RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NUDT19A8MXV4 375 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 LDHBP07195 334 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 P4HBP07237 508 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 LIMS1P48059 325 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 PCBP3P57721 371 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 GALNT18Q6P9A2 607 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 AGMOQ6ZNB7 445 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 HDAC8Q9BY41 377 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 BCL11AQ9H165 835 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 SMPD4Q9NXE4 827 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
ECHDC1-201ENST00000368287 FKTNO75072 461 aa5.94□□□□□ -1.46
ECHDC1-201ENST00000368287 CHMP4BP1P59074 171 aa5.94□□□□□ -1.46
ECHDC1-201ENST00000368287 LAPTM5Q13571 262 aa5.94□□□□□ -1.46
ECHDC1-201ENST00000368287 MAP3K11Q16584 847 aa5.94□□□□□ -1.46
ECHDC1-201ENST00000368287 FRMD6Q96NE9 622 aa5.94□□□□□ -1.46
ECHDC1-201ENST00000368287 SORCS2Q96PQ0 1159 aa5.94□□□□□ -1.46
ECHDC1-201ENST00000368287 TMEM82A0PJX8 343 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 UNCXA6NJT0 531 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 PFKLP17858 780 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 ITGAEP38570 1179 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 LIG3P49916 1009 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 HMGA2P52926 109 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 KIR3DS1Q14943 382 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 HSF5Q4G112 596 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 ZNF326Q5BKZ1 582 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 DIEXFQ68CQ4 756 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 LSRQ86X29 649 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 SLFN12Q8IYM2 578 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 DAGLBQ8NCG7 672 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 TCTN2Q96GX1 697 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 SPATA25Q9BR10 227 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 WWC3Q9ULE0 1092 aa5.93□□□□□ -1.46
ECHDC1-201ENST00000368287 WTIPA6NIX2 430 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 PRPF40AO75400 957 aaKnown RBP5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 TMEM201Q5SNT2 666 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 ZPBP2Q6X784 338 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 LIPIQ6XZB0 460 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 FBXO33Q7Z6M2 555 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 ADGRG2Q8IZP9 1017 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 CCDC74BQ96LY2 380 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 BCL2L13Q9BXK5 485 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 TNFRSF10DQ9UBN6 386 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 SUSD2Q9UGT4 822 aa5.92□□□□□ -1.46
ECHDC1-201ENST00000368287 A0A1B0GTL3 188 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 SYPP08247 313 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 PRKCAP17252 672 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 IGFBP6P24592 240 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 RBM25P49756 843 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 CYP4F8P98187 520 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 XPCQ01831 940 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 VWA3BQ502W6 1294 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 RPTNQ6XPR3 784 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 NPM2Q86SE8 214 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 ZNF655Q8N720 491 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 LINC00116Q8NCU8 138 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 FCRL2Q96LA5 508 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 TNFRSF12AQ9NP84 129 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 RNF19AQ9NV58 838 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 KLHL3Q9UH77 587 aa5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 GPR55Q9Y2T6 319 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-201ENST00000368287 FADS2P1A8MWK0 482 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 ITGB3P05106 788 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 TFE3P19532 575 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 CNR2P34972 360 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 ZNF200P98182 395 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 CBX2Q14781 532 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 BBS9Q3SYG4 887 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 PLEKHN1Q494U1 663 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 CPZQ66K79 652 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 PHACTR4Q8IZ21 702 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 NUP43Q8NFH3 380 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 GIPC2Q8TF65 315 aa5.9□□□□□ -1.46
ECHDC1-201ENST00000368287 C1QTNF3-AMACRE9PGA6 284 aa5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 MSL3P1P0C860 447 aa5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 ZNF16P17020 682 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 PSMD2Q13200 908 aa5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 ZC3H14Q6PJT7 736 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 DDX1Q92499 740 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 DUSP9Q99956 384 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 MENTQ9BUN1 341 aa5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 SCAND2PQ9GZW5 306 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 DUSP10Q9Y6W6 482 aa5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 IRS2Q9Y4H2 1338 aa5.89□□□□□ -1.47
ECHDC1-201ENST00000368287 BPNT1O95861 308 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 EIF4BP23588 611 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 GNA15P30679 374 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 GBP1P32455 592 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 GDF5P43026 501 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 RNF4P78317 190 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 FNIP1Q8TF40 1166 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 MRS2Q9HD23 443 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 PARP2Q9UGN5 583 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 PMF1-BGLAPU3KQ54 211 aa5.88□□□□□ -1.47
ECHDC1-201ENST00000368287 CHURC1-FNTBB4DL54 471 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 PLA2G1BP04054 148 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 C6P13671 934 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 MAPKAPK2P49137 400 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms