RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 ZPR1O75312 459 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 GOLGA6DP0CG33 693 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 KLK7P49862 253 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 GTF2A1P52655 376 aaPredicted RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 TUBB4BP68371 445 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 SLC7A5Q01650 507 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 CKAP4Q07065 602 aaKnown RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 SMCR8Q8TEV9 937 aaPredicted RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 CCDC47Q96A33 483 aaKnown RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 CENPHQ9H3R5 247 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 MED4Q9NPJ6 270 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 AGPAT5Q9NUQ2 364 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 PARP4Q9UKK3 1724 aaKnown RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 NWD2Q9ULI1 1742 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 MCM3P25205 808 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 ARHGAP25P42331 645 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 ZNF658Q5TYW1 1059 aaPredicted RBP9.17□□□□□ -0.94
CD46-208ENST00000367042 DTHD1Q6ZMT9 781 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 HEATR3Q7Z4Q2 680 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 ADGRA1Q86SQ6 560 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 VGLL2Q8N8G2 317 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 FAM76AQ8TAV0 307 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 PHF20Q9BVI0 1012 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 PSD3Q9NYI0 1048 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 NHSL1Q5SYE7 1610 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 AKR1B10O60218 316 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 VEGFAP15692 232 aaPredicted RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 CCT5P48643 541 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 ASIC1P78348 528 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 PKN1Q16512 942 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 KRT26Q7Z3Y9 468 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 ELOA2Q8IYF1 753 aaPredicted RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 SPATA20Q8TB22 786 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 NOC4LQ9BVI4 516 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 MMRN2Q9H8L6 949 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 FAM207AQ9NSI2 230 aaPredicted RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 MYO1AQ9UBC5 1043 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 H0YHG0 523 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 TULP1O00294 542 aaPredicted RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 USP5P45974 858 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 USP14P54578 494 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 RNASE9P60153 205 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 LRRC31Q6UY01 552 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 MB21D1Q8N884 522 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 RBM28Q9NW13 759 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 LIMA1Q9UHB6 759 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 H7C1D1 291 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 SEMA3EO15041 775 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 PRPF3O43395 683 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 ZEB2O60315 1214 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 TUBBP07437 444 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 SCG2P13521 617 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 PBX1P40424 430 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 LIG3P49916 1009 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 PMS1P54277 932 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 EVX2Q03828 476 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 CHRNDQ07001 517 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 PDE4DQ08499 809 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 INF2Q27J81 1249 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 CCDC152Q4G0S7 254 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 TDRD12Q587J7 1177 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 IQCEQ6IPM2 695 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 SECISBP2LQ93073 1101 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 SHISA4Q96DD7 197 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 TUBGCP2Q9BSJ2 902 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 SELENOOQ9BVL4 669 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 LACRTQ9GZZ8 138 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 FAM107BQ9H098 131 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 NHEJ1Q9H9Q4 299 aaPredicted RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 SMARCAL1Q9NZC9 954 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 LRWD1Q9UFC0 647 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
CD46-208ENST00000367042 STX8Q9UNK0 236 aa9.16□□□□□ -0.94
CD46-208ENST00000367042 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.94
CD46-208ENST00000367042 SHANK3Q9BYB0 1731 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 MYH8P13535 1937 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 USO1O60763 962 aaKnown RBP9.15□□□□□ -0.94
CD46-208ENST00000367042 ATP2C1P98194 919 aaPredicted RBP9.15□□□□□ -0.94
CD46-208ENST00000367042 ATP2B2Q01814 1243 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 CAVIN4Q5BKX8 364 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 SUSD4Q5VX71 490 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 KCTD16Q68DU8 428 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 C2CD5Q86YS7 1000 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 KAT14Q9H8E8 782 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 VAT1LQ9HCJ6 419 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 EXOC1Q9NV70 894 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 SHTN1A0MZ66 631 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 BCAS4Q8TDM0 211 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 IFT81Q8WYA0 676 aa9.15□□□□□ -0.94
CD46-208ENST00000367042 SAMM50Q9Y512 469 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms