RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MYH15Q9Y2K3 1946 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
CAPN9-203ENST00000366666 USP17L10C9JJH3 530 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 H3BQV1 296 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 F13A1P00488 732 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 PDCP20941 246 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 MAP3K9P80192 1104 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 NOL9Q5SY16 702 aaKnown RBP14.12□□□□□ -0.15
CAPN9-203ENST00000366666 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 KRT40Q6A162 431 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 DCAF4Q8WV16 495 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 GMCL1Q96IK5 515 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 SPZ1Q9BXG8 430 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 RIOX1Q9H6W3 641 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 JMJD4Q9H9V9 463 aa14.12□□□□□ -0.15
CAPN9-203ENST00000366666 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 KIF28PB7ZC32 967 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 TMEM232C9JQI7 657 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 GNAQP50148 359 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 ELP3Q9H9T3 547 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 GOPCQ9HD26 462 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 FBXO28Q9NVF7 368 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 PRDM4Q9UKN5 801 aa14.11□□□□□ -0.15
CAPN9-203ENST00000366666 PPP1R11O60927 126 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 BMP3P12645 472 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 SCG2P13521 617 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 NF2P35240 595 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 AKAP17AQ02040 695 aaKnown RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 HS1BP3Q53T59 392 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 GPATCH4Q5T3I0 446 aaKnown RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 ZNF280CQ8ND82 737 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 KIAA1683Q9H0B3 1180 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 ITGBL1O95965 494 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 TAL1P17542 331 aaPredicted RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 IREB2P48200 963 aaKnown RBP14.1□□□□□ -0.15
CAPN9-203ENST00000366666 RESTQ13127 1097 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 WWC2Q6AWC2 1192 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 ZSCAN30Q86W11 494 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
CAPN9-203ENST00000366666 RLFQ13129 1914 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 HMGCS2P54868 508 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 BACE1P56817 501 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 NPY5RQ15761 445 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
CAPN9-203ENST00000366666 OXER1Q8TDS5 423 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 WDR18Q9BV38 432 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 GINM1Q9NU53 330 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 SYNPO2Q9UMS6 1093 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 TRPM7Q96QT4 1865 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 MAP3K11Q16584 847 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 CST9Q5W186 159 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
CAPN9-203ENST00000366666 VCAM1P19320 739 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 IKQ13123 557 aaPredicted RBP14.08□□□□□ -0.16
CAPN9-203ENST00000366666 NOM1Q5C9Z4 860 aaKnown RBP14.08□□□□□ -0.16
CAPN9-203ENST00000366666 HEATR3Q7Z4Q2 680 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 COA7Q96BR5 231 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 RRP36Q96EU6 259 aaKnown RBP14.08□□□□□ -0.16
CAPN9-203ENST00000366666 SH2D4AQ9H788 454 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 LMBRD1Q9NUN5 540 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 CSADQ9Y600 493 aa14.08□□□□□ -0.16
CAPN9-203ENST00000366666 BTBD18B2RXH4 712 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 IRF6O14896 467 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 CELF2O95319 508 aaKnown RBP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 MMP1P03956 469 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 SMARCA1P28370 1054 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 TERF1P54274 439 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 KIF23Q02241 960 aaPredicted RBP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 DNM1Q05193 864 aaKnown RBP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 NR5A1Q13285 461 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 WASF1Q92558 559 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 MTMR8Q96EF0 704 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 PHF20Q9BVI0 1012 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 PRR12Q9ULL5 1215 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 COL11A1P12107 1806 aaPredicted RBP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 STXBP3O00186 592 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 GJA5P36382 358 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 STAT2P52630 851 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 RBM10P98175 930 aaKnown RBP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 LDLRAD1Q5T700 205 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 FTOQ9C0B1 505 aaKnown RBP eCLIP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 AS3MTQ9HBK9 375 aa14.07□□□□□ -0.16
CAPN9-203ENST00000366666 GPBP1L1Q9HC44 474 aaPredicted RBP14.07□□□□□ -0.16
CAPN9-203ENST00000366666 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 KIF3CO14782 793 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
CAPN9-203ENST00000366666 SYDE2Q5VT97 1194 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 BTNL9Q6UXG8 535 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 ARMC9Q7Z3E5 817 aa14.06□□□□□ -0.16
CAPN9-203ENST00000366666 KIFC2Q96AC6 838 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms