RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 SNRNP48Q6IEG0 339 aaKnown RBP12.25□□□□□ -0.45
YBX3-203ENST00000366286 DPP9Q86TI2 863 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 ABRAQ8N0Z2 381 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 PRPF38AQ8NAV1 312 aaKnown RBP12.25□□□□□ -0.45
YBX3-203ENST00000366286 DIS3LQ8TF46 1054 aaKnown RBP12.25□□□□□ -0.45
YBX3-203ENST00000366286 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 GMCL1Q96IK5 515 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 MMP19Q99542 508 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 DSCC1Q9BVC3 393 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 TEX13BQ9BXU2 312 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 FEM1BQ9UK73 627 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 RAD50Q92878 1312 aa12.25□□□□□ -0.45
YBX3-203ENST00000366286 TMEM232C9JQI7 657 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 IGHA2P01877 340 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
YBX3-203ENST00000366286 FCER1AP12319 257 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 MCCP23508 829 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 SLC1A4P43007 532 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 STAT2P52630 851 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 MFSD6Q6ZSS7 791 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 MTMR7Q9Y216 660 aa12.24□□□□□ -0.45
YBX3-203ENST00000366286 ZNF213O14771 459 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 ZBED4O75132 1171 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 CYBAP13498 195 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 CAPN2P17655 700 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 CYP2C19P33261 490 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 IKQ13123 557 aaPredicted RBP12.23□□□□□ -0.45
YBX3-203ENST00000366286 OLFML2BQ68BL8 750 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 KCTD1Q719H9 257 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 TRPV1Q8NER1 839 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 MAML3Q96JK9 1138 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 RNF41Q9H4P4 317 aaPredicted RBP12.23□□□□□ -0.45
YBX3-203ENST00000366286 RAVER2Q9HCJ3 691 aaKnown RBP12.23□□□□□ -0.45
YBX3-203ENST00000366286 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 OGDHLQ9ULD0 1010 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 RIPK3Q9Y572 518 aa12.23□□□□□ -0.45
YBX3-203ENST00000366286 CTDP1Q9Y5B0 961 aaPredicted RBP12.23□□□□□ -0.45
YBX3-203ENST00000366286 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 PGK2P07205 417 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 CHMLP26374 656 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
YBX3-203ENST00000366286 KCTD2Q14681 263 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 LHX8Q68G74 356 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 ANKLE1Q8NAG6 615 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 DCAF4Q8WV16 495 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 PAWRQ96IZ0 340 aaKnown RBP12.22□□□□□ -0.45
YBX3-203ENST00000366286 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
YBX3-203ENST00000366286 PLA2G6O60733 806 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
YBX3-203ENST00000366286 CNGA1P29973 690 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 OAZ1P54368 228 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 IMMTQ16891 758 aaKnown RBP12.21□□□□□ -0.45
YBX3-203ENST00000366286 ZNF792Q3KQV3 632 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 CHURC1Q8WUH1 139 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 RUFY2Q8WXA3 655 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 ESR2Q92731 530 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 DPF3Q92784 378 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 ZKSCAN3Q9BRR0 538 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 DDX20Q9UHI6 824 aaKnown RBP12.21□□□□□ -0.45
YBX3-203ENST00000366286 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
YBX3-203ENST00000366286 ZNF536O15090 1300 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 FRMPD2Q68DX3 1309 aaPredicted RBP12.2□□□□□ -0.46
YBX3-203ENST00000366286 B4E1Z4 1266 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 KDM4AO75164 1064 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 FDX1P10109 184 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 SNAP25P60880 206 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
YBX3-203ENST00000366286 CENPQQ7L2Z9 268 aaPredicted RBP12.2□□□□□ -0.46
YBX3-203ENST00000366286 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 PRR12Q9ULL5 1215 aa12.2□□□□□ -0.46
YBX3-203ENST00000366286 PFASO15067 1338 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 H0YGN5 161 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 MSCO60682 206 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 PDHBP11177 359 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 NT5C2P49902 561 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 PTH1RQ03431 593 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 TTBK2Q6IQ55 1244 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 SKAP1Q86WV1 359 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 CHST13Q8NET6 341 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 TTC14Q96N46 770 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 C11orf49Q9H6J7 331 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
YBX3-203ENST00000366286 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
YBX3-203ENST00000366286 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 SGSM2O43147 1006 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 SEPT4O43236 478 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
YBX3-203ENST00000366286 SLC16A2P36021 539 aa12.18□□□□□ -0.46
YBX3-203ENST00000366286 PRAMEF19Q5SWL8 479 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms