RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 NELFBQ8WX92 580 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
SMC3-201ENST00000361804 ABHD10Q9NUJ1 306 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 CDC23Q9UJX2 597 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 CEP131Q9UPN4 1083 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 REXO2Q9Y3B8 237 aaKnown RBP11.96□□□□□ -0.49
SMC3-201ENST00000361804 BRCA2P51587 3418 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.5
SMC3-201ENST00000361804 BEND6Q5SZJ8 279 aaPredicted RBP11.96□□□□□ -0.5
SMC3-201ENST00000361804 LRRC15Q8TF66 581 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 FAM84BQ96KN1 310 aaPredicted RBP11.96□□□□□ -0.5
SMC3-201ENST00000361804 RNF26Q9BY78 433 aaPredicted RBP11.96□□□□□ -0.5
SMC3-201ENST00000361804 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 FAN1Q9Y2M0 1017 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 PRCPP42785 496 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 VPS72Q15906 364 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 TRIML1Q8N9V2 468 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.5
SMC3-201ENST00000361804 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.5
SMC3-201ENST00000361804 IGHMBP2P38935 993 aaKnown RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 NLRP5P59047 1200 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 UBXN1Q04323 297 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 E2F4Q16254 413 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 SLC10A5Q5PT55 438 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 CATIPQ7Z7H3 387 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 TNFRSF25Q93038 417 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 DUSP10Q9Y6W6 482 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 SCN9AQ15858 1988 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 GOLGA6L9A6NEM1 432 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 FGRP09769 529 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 COPB1P53618 953 aaKnown RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 KCTD19Q17RG1 926 aaPredicted RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 RIN2Q8WYP3 895 aaPredicted RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 HPS3Q969F9 1004 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 CTAGE9A4FU28 777 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 KCNJ18B7U540 433 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 KCNJ12Q14500 433 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 FKBP15Q5T1M5 1219 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 CTR9Q6PD62 1173 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
SMC3-201ENST00000361804 TNS1Q9HBL0 1735 aaKnown RBP11.95□□□□□ -0.5
SMC3-201ENST00000361804 CNTNAP5Q8WYK1 1306 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 TTC26A0AVF1 554 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 IRF2BP1Q8IU81 584 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
SMC3-201ENST00000361804 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
SMC3-201ENST00000361804 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
SMC3-201ENST00000361804 ZSCAN26Q16670 478 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 RNF41Q9H4P4 317 aaPredicted RBP11.94□□□□□ -0.5
SMC3-201ENST00000361804 ZNF185O15231 689 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 FILIP1LQ4L180 1135 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 RASSF8Q8NHQ8 419 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 CCDC102AQ96A19 550 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 TMEM60Q9H2L4 133 aa11.94□□□□□ -0.5
SMC3-201ENST00000361804 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 MYO1BO43795 1136 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 TPM1P09493 284 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 PRDX5P30044 214 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 PRPF3O43395 683 aaKnown RBP11.93□□□□□ -0.5
SMC3-201ENST00000361804 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
SMC3-201ENST00000361804 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
SMC3-201ENST00000361804 PAK1Q13153 545 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 DYNLL2Q96FJ2 89 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 GSDMAQ96QA5 445 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 AGPAT5Q9NUQ2 364 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 CCDC151A5D8V7 595 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 MAP2K7O14733 419 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 GNAT2P19087 354 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 CYP27A1Q02318 531 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 SMCR8Q8TEV9 937 aaPredicted RBP11.93□□□□□ -0.5
SMC3-201ENST00000361804 RABEP2Q9H5N1 569 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
SMC3-201ENST00000361804 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
SMC3-201ENST00000361804 XBP1P17861 261 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 TMTC2Q8N394 836 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 NAPGQ99747 312 aaPredicted RBP11.92□□□□□ -0.5
SMC3-201ENST00000361804 RPN1P04843 607 aaKnown RBP11.92□□□□□ -0.5
SMC3-201ENST00000361804 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 CCDC152Q4G0S7 254 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 ELOA2Q8IYF1 753 aaPredicted RBP11.92□□□□□ -0.5
SMC3-201ENST00000361804 C10orf67Q8IYJ2 551 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 MMS19Q96T76 1030 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 PSMB7Q99436 277 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 CDCA7Q9BWT1 371 aaPredicted RBP11.92□□□□□ -0.5
SMC3-201ENST00000361804 B4DLN1 442 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms