RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 USP17L13C9JLJ4 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L11C9JVI0 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L18D6R9N7 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L22D6RA61 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L17D6RBQ6 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L19D6RCP7 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L20D6RJB6 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 CYTH3O43739 400 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 FLOT1O75955 427 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 SLC10A3P09131 477 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 USP17L24Q0WX57 530 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 TREML2Q5T2D2 321 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 ADGRF4Q8IZF3 695 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 SMARCC2Q8TAQ2 1214 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 RNF26Q9BY78 433 aaPredicted RBP19.68■□□□□ 0.74
LMNA-202ENST00000361308 CCL15-CCL14A0A0B4J2E2 113 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 PRPF3O43395 683 aaKnown RBP19.68■□□□□ 0.74
LMNA-202ENST00000361308 FMNL1O95466 1100 aaPredicted RBP19.68■□□□□ 0.74
LMNA-202ENST00000361308 CCL15Q16663 113 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 DEFB115Q30KQ5 88 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
LMNA-202ENST00000361308 CATSPERGQ6ZRH7 1159 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 PRPF38AQ8NAV1 312 aaKnown RBP19.68■□□□□ 0.74
LMNA-202ENST00000361308 PIBF1Q8WXW3 757 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 KIFC2Q96AC6 838 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
LMNA-202ENST00000361308 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
LMNA-202ENST00000361308 GJB2P29033 226 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
LMNA-202ENST00000361308 MOGSQ13724 837 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 COG2Q14746 738 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 SLC35G1Q2M3R5 365 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 RRP36Q96EU6 259 aaKnown RBP19.67■□□□□ 0.74
LMNA-202ENST00000361308 SLF1Q9BQI6 1058 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 FBXO28Q9NVF7 368 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 RBM27Q9P2N5 1060 aaKnown RBP19.67■□□□□ 0.74
LMNA-202ENST00000361308 PRR12Q9ULL5 1215 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 CNTNAP5Q8WYK1 1306 aa19.67■□□□□ 0.74
LMNA-202ENST00000361308 GRM1Q13255 1194 aa19.66■□□□□ 0.74
LMNA-202ENST00000361308 PABPC4Q13310 644 aaKnown RBP eCLIP19.66■□□□□ 0.745e-12■□□□□ 8.9
LMNA-202ENST00000361308 HOMER1Q86YM7 354 aa19.66■□□□□ 0.74
LMNA-202ENST00000361308 JMJD4Q9H9V9 463 aa19.66■□□□□ 0.74
LMNA-202ENST00000361308 HOXC10Q9NYD6 342 aa19.66■□□□□ 0.74
LMNA-202ENST00000361308 SEC63Q9UGP8 760 aaKnown RBP19.66■□□□□ 0.74
LMNA-202ENST00000361308 hCG_1642624A0A1W2PR95 340 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 MANSC4A6NHS7 340 aaPredicted RBP19.65■□□□□ 0.74
LMNA-202ENST00000361308 RASSF10A6NK89 507 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 FAM155AB1AL88 458 aaPredicted RBP19.65■□□□□ 0.74
LMNA-202ENST00000361308 DEXIO95424 95 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 FDPSP14324 419 aaKnown RBP19.65■□□□□ 0.74
LMNA-202ENST00000361308 PIGSQ96S52 555 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 CWC22Q9HCG8 908 aaKnown RBP19.65■□□□□ 0.74
LMNA-202ENST00000361308 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 STK36Q9NRP7 1315 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 CYP4F22Q6NT55 531 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 GPAT2Q6NUI2 795 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 BRI3BPQ8WY22 251 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 WASF1Q92558 559 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 PPP1R9AQ9ULJ8 1098 aa19.65■□□□□ 0.74
LMNA-202ENST00000361308 ZBTB5O15062 677 aa19.64■□□□□ 0.73
LMNA-202ENST00000361308 OSBPP22059 807 aa19.64■□□□□ 0.73
LMNA-202ENST00000361308 INHBEP58166 350 aa19.64■□□□□ 0.73
LMNA-202ENST00000361308 IRX3P78415 501 aaPredicted RBP19.64■□□□□ 0.73
LMNA-202ENST00000361308 PTPRFP10586 1907 aa19.64■□□□□ 0.73
LMNA-202ENST00000361308 PNMA6FA0A0J9YX94 578 aa19.63■□□□□ 0.73
LMNA-202ENST00000361308 TESPA1A2RU30 521 aaPredicted RBP19.63■□□□□ 0.73
LMNA-202ENST00000361308 DSG3P32926 999 aa19.63■□□□□ 0.73
LMNA-202ENST00000361308 MTMR8Q96EF0 704 aa19.63■□□□□ 0.73
LMNA-202ENST00000361308 BTBD19C9JJ37 291 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 FDX1P10109 184 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 PKN1Q16512 942 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 CDC37Q16543 378 aaPredicted RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 PFKFB3Q16875 520 aaPredicted RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 ANKRD23Q86SG2 305 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 ALG1Q9BT22 464 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 SLC45A1Q9Y2W3 748 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 CTDP1Q9Y5B0 961 aaPredicted RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 BAZ2BQ9UIF8 2168 aaKnown RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 PDHXO00330 501 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 SCG2P13521 617 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 SNAP25P60880 206 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 NOGQ13253 232 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 QRICH1Q2TAL8 776 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 LARP1BQ659C4 914 aaKnown RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 CAPNS2Q96L46 248 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 PTPN18Q99952 460 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 ASCC2Q9H1I8 757 aaPredicted RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 RANBP17Q9H2T7 1088 aaKnown RBP19.62■□□□□ 0.73
LMNA-202ENST00000361308 PNMA3Q9UL41 463 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 MYPNQ86TC9 1320 aa19.62■□□□□ 0.73
LMNA-202ENST00000361308 VWA5AO00534 786 aa19.61■□□□□ 0.73
LMNA-202ENST00000361308 ZBED4O75132 1171 aa19.61■□□□□ 0.73
LMNA-202ENST00000361308 SREBF2Q12772 1141 aa19.61■□□□□ 0.73
LMNA-202ENST00000361308 ATG4CQ96DT6 458 aa19.61■□□□□ 0.73
LMNA-202ENST00000361308 AIFM3Q96NN9 605 aa19.61■□□□□ 0.73
LMNA-202ENST00000361308 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
LMNA-202ENST00000361308 ADAMTS5Q9UNA0 930 aa19.61■□□□□ 0.73
LMNA-202ENST00000361308 SPDYE16A6NNV3 312 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms