RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 TFR2Q9UP52 801 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 TRIM58Q8NG06 486 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 DIP2AQ14689 1571 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 UBN2Q6ZU65 1347 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 PRR36Q9H6K5 1346 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 PPIP5K2O43314 1243 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 BYSLQ13895 437 aaKnown RBP14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 MB21D2Q8IYB1 491 aaPredicted RBP14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 CDKL5O76039 1030 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 ANP32DO95626 131 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 ARID4AP29374 1257 aaPredicted RBP14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 GRIN1Q05586 938 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 WASHC4Q2M389 1173 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 CACNA2D3Q8IZS8 1091 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 HVCN1Q96D96 273 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 LACRTQ9GZZ8 138 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 BAIAP2L1Q9UHR4 511 aa14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPTSSB-201ENST00000359175 WDR59Q6PJI9 974 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 OSBPL9Q96SU4 736 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 VPS16Q9H269 839 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 WDR19Q8NEZ3 1342 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 TTC26A0AVF1 554 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 TTF1Q15361 905 aaPredicted RBP14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 QPCTQ16769 361 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 IFT20Q8IY31 132 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 GSDMAQ96QA5 445 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 GDF3Q9NR23 364 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 IQSEC3Q9UPP2 1182 aaPredicted RBP14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 PCDHGC5Q9Y5F6 944 aa14.8□□□□□ -0.04
SPTSSB-201ENST00000359175 RCCD1A6NED2 376 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 LUC7L2Q9Y383 392 aaKnown RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 ECM29Q5VYK3 1845 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 CYLC1P35663 651 aaPredicted RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 PDE6BP35913 854 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 TFCP2Q12800 502 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 MEA1Q16626 185 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 TSR1Q2NL82 804 aaKnown RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 CCDC181Q5TID7 509 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 CWF19L1Q69YN2 538 aaKnown RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 SH3RF1Q7Z6J0 888 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 RAB11FIP4Q86YS3 637 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 DBNDD2Q9BQY9 259 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 SLC12A6Q9UHW9 1150 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 NWD2Q9ULI1 1742 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 ANTXR2P58335 489 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 PPARAQ07869 468 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 HIBCHQ6NVY1 386 aaPredicted RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 RPUSD2Q8IZ73 545 aaKnown RBP14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 TMBIM4Q9HC24 238 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 CAPN11Q9UMQ6 739 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 MAST3O60307 1309 aa14.79□□□□□ -0.04
SPTSSB-201ENST00000359175 USP6P35125 1406 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 H7C1W4 665 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 PAEPP09466 180 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 LINGO3P0C6S8 592 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 NEFHP12036 1026 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 PIP4K2AP48426 406 aaPredicted RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 PAK2Q13177 524 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TRIM29Q14134 588 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TCP11X2Q5H9J9 407 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 C8orf74Q6P047 294 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TRIM73Q86UV7 250 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TSGA10Q9BZW7 698 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 YIPF3Q9GZM5 350 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TMX4Q9H1E5 349 aaPredicted RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 SRPRBQ9Y5M8 271 aaKnown RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 CPDO75976 1380 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 A6NHS1 94 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TCP1P17987 556 aaKnown RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TOB1P50616 345 aaPredicted RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 BLMHQ13867 455 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 ARMC3Q5W041 872 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 SLC30A9Q6PML9 568 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 NOSTRINQ8IVI9 506 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 CCDC170Q8IYT3 715 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 ZNF513Q8N8E2 541 aaPredicted RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 TAB2Q9NYJ8 693 aa14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 NOP53Q9NZM5 478 aaKnown RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 CCDC9Q9Y3X0 531 aaKnown RBP14.78□□□□□ -0.04
SPTSSB-201ENST00000359175 GSTA1P08263 222 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 FAM153BP0C7A2 387 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 ACEP12821 1306 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 CDC37Q16543 378 aaPredicted RBP14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 FAM153CQ494X1 144 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 GKAP1Q5VSY0 366 aaPredicted RBP14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 SENP2Q9HC62 589 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 PAG1Q9NWQ8 432 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 FAM153AQ9UHL3 310 aa14.77□□□□□ -0.04
SPTSSB-201ENST00000359175 MRPS25P82663 173 aaKnown RBP14.77□□□□□ -0.05
SPTSSB-201ENST00000359175 UBXN1Q04323 297 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms