RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
GABPB1-202ENST00000359031 HSD3B7Q9H2F3 369 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 IGKV6D-41A0A0C4DH26 115 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 hCG_1984214I3L0E3 225 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 BMP6P22004 513 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 LONP1P36776 959 aaKnown RBP16.94■□□□□ 0.3
GABPB1-202ENST00000359031 TGFB2P61812 414 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 ZNF713Q8N859 430 aaPredicted RBP16.94■□□□□ 0.3
GABPB1-202ENST00000359031 CCDC150Q8NCX0 1101 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.35e-7■■□□□ 11.6
GABPB1-202ENST00000359031 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
GABPB1-202ENST00000359031 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 PCDHA6Q9UN73 950 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 PCDHA8Q9Y5H6 950 aa16.94■□□□□ 0.3
GABPB1-202ENST00000359031 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 A0A087X0B3 334 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 H0YIN7 160 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 HLA-DOAP06340 250 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 LMOD1P29536 600 aaPredicted RBP16.93■□□□□ 0.3
GABPB1-202ENST00000359031 MCM7P33993 719 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 PRIMPOLQ96LW4 560 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 ZMYND12Q9H0C1 365 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
GABPB1-202ENST00000359031 MTMR4Q9NYA4 1195 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
GABPB1-202ENST00000359031 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 MYH4Q9Y623 1939 aa16.93■□□□□ 0.3
GABPB1-202ENST00000359031 LAD1O00515 517 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 GOLGA8HP0CJ92 632 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 TXLNAP40222 546 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 CDC42EP5Q6NZY7 148 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 KRT25Q7Z3Z0 450 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 FILIP1Q7Z7B0 1213 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 GRAMD1CQ8IYS0 662 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 IQUBQ8NA54 791 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 ENOX1Q8TC92 643 aaKnown RBP16.92■□□□□ 0.3
GABPB1-202ENST00000359031 PAGE5Q96GU1 130 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 MRIQ9BWK5 157 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 EHD4Q9H223 541 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 MTMR7Q9Y216 660 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 SCN9AQ15858 1988 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 PDHBP11177 359 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 ERCC5P28715 1186 aaPredicted RBP16.92■□□□□ 0.3
GABPB1-202ENST00000359031 GNA11P29992 359 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 CRKP46108 304 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 NAPAP54920 295 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 HDLBPQ00341 1268 aaKnown RBP16.92■□□□□ 0.3
GABPB1-202ENST00000359031 E2F4Q16254 413 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 USP17L2Q6R6M4 530 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 ZDHHC15Q96MV8 337 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 C6orf50Q9HD87 102 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
GABPB1-202ENST00000359031 PSME4Q14997 1843 aa16.92■□□□□ 0.3
GABPB1-202ENST00000359031 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 AKR1B1P15121 316 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 SCNN1DP51172 638 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 DPYDQ12882 1025 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 STRIP1Q5VSL9 837 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
GABPB1-202ENST00000359031 TMC6Q7Z403 805 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 RASGRP4Q8TDF6 673 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 CNKSR1Q969H4 720 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 MXD3Q9BW11 206 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 RIOX1Q9H6W3 641 aa16.91■□□□□ 0.3
GABPB1-202ENST00000359031 TTLL1O95922 423 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 SERPINC1P01008 464 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 ATP1A3P13637 1013 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 DPEP1P16444 411 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 PRPHP41219 470 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 CCZ1BP86790 482 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
GABPB1-202ENST00000359031 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
GABPB1-202ENST00000359031 IL17AQ16552 155 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 RASGRP2Q7LDG7 609 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
GABPB1-202ENST00000359031 USP17L5A8MUK1 530 aa16.89■□□□□ 0.29
GABPB1-202ENST00000359031 SHMT1P34896 483 aa16.89■□□□□ 0.29
GABPB1-202ENST00000359031 UBASH3AP57075 661 aa16.89■□□□□ 0.29
GABPB1-202ENST00000359031 PDXDC2PQ6P474 469 aa16.89■□□□□ 0.29
GABPB1-202ENST00000359031 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
GABPB1-202ENST00000359031 FANCLQ9NW38 375 aa16.89■□□□□ 0.29
GABPB1-202ENST00000359031 UQCRHLA0A096LP55 91 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 NRDCO43847 1150 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 ECE2O60344 883 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
GABPB1-202ENST00000359031 UQCRHP07919 91 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 SKILP12757 684 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 AFMP43652 599 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.296e-6■□□□□ 10
GABPB1-202ENST00000359031 INF2Q27J81 1249 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 DACT2Q5SW24 774 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms