RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SH2D4AQ9H788 454 aa19.63■□□□□ 0.73
TPM1-205ENST00000357980 VCPKMTQ9H867 229 aa19.63■□□□□ 0.73
TPM1-205ENST00000357980 hCG_1984214I3L0E3 225 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 BMP3P12645 472 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 SUPT20HL1Q3ZLR7 823 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 ZNF713Q8N859 430 aaPredicted RBP19.62■□□□□ 0.73
TPM1-205ENST00000357980 CCDC148Q8NFR7 591 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 BRMS1Q9HCU9 246 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 CLIC4Q9Y696 253 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 USP17L10C9JJH3 530 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 ADAMTS3O15072 1205 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 BTNL9Q6UXG8 535 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 SULF1Q8IWU6 871 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 SPICE1Q8N0Z3 855 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 DAGLBQ8NCG7 672 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 ZC3H15Q8WU90 426 aaKnown RBP19.62■□□□□ 0.73
TPM1-205ENST00000357980 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 WRNIP1Q96S55 665 aa19.62■□□□□ 0.73
TPM1-205ENST00000357980 OTOFQ9HC10 1997 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 PNMA6FA0A0J9YX94 578 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 POTECB2RU33 542 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 M0R2N6 131 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 YEATS4O95619 227 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 TOB1P50616 345 aaPredicted RBP19.61■□□□□ 0.73
TPM1-205ENST00000357980 ANO1Q5XXA6 986 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 GALNT17Q6IS24 598 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 SCYL3Q8IZE3 742 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 LINC00301Q8NCQ3 95 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 ZMYND12Q9H0C1 365 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 TAF1DQ9H5J8 278 aaPredicted RBP19.61■□□□□ 0.73
TPM1-205ENST00000357980 PCDHA4Q9UN74 947 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 FZD1Q9UP38 647 aa19.61■□□□□ 0.73
TPM1-205ENST00000357980 ZBTB5O15062 677 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 PPP1R11O60927 126 aaPredicted RBP19.6■□□□□ 0.73
TPM1-205ENST00000357980 EARS2Q5JPH6 523 aaKnown RBP19.6■□□□□ 0.73
TPM1-205ENST00000357980 CCDC12Q8WUD4 166 aaPredicted RBP19.6■□□□□ 0.73
TPM1-205ENST00000357980 PGBD1Q96JS3 809 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
TPM1-205ENST00000357980 ESYT2A0FGR8 921 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 IQCA1LA6NCM1 817 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 NAPAP54920 295 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 RILPL1Q5EBL4 403 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 DLK2Q6UY11 383 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 KRT26Q7Z3Y9 468 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 BLIDQ8IZY5 108 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 KIAA1683Q9H0B3 1180 aa19.6■□□□□ 0.73
TPM1-205ENST00000357980 FAM205CA6NFA0 338 aa19.59■□□□□ 0.73
TPM1-205ENST00000357980 TMEM232C9JQI7 657 aa19.59■□□□□ 0.73
TPM1-205ENST00000357980 ZKSCAN4Q969J2 545 aaPredicted RBP19.59■□□□□ 0.73
TPM1-205ENST00000357980 PTPAQ15257 358 aa19.58■□□□□ 0.73
TPM1-205ENST00000357980 ZYXQ15942 572 aaKnown RBP19.58■□□□□ 0.73
TPM1-205ENST00000357980 NOM1Q5C9Z4 860 aaKnown RBP19.58■□□□□ 0.73
TPM1-205ENST00000357980 NOL9Q5SY16 702 aaKnown RBP19.58■□□□□ 0.73
TPM1-205ENST00000357980 FAM83BQ5T0W9 1011 aa19.58■□□□□ 0.73
TPM1-205ENST00000357980 SYDE2Q5VT97 1194 aa19.58■□□□□ 0.73
TPM1-205ENST00000357980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.58■□□□□ 0.73
TPM1-205ENST00000357980 KCNG4Q8TDN1 519 aa19.58■□□□□ 0.73
TPM1-205ENST00000357980 PTPRAP18433 802 aa19.58■□□□□ 0.72
TPM1-205ENST00000357980 SLC39A14Q15043 492 aa19.58■□□□□ 0.72
TPM1-205ENST00000357980 SF3A1Q15459 793 aaKnown RBP19.58■□□□□ 0.72
TPM1-205ENST00000357980 QRICH1Q2TAL8 776 aa19.58■□□□□ 0.72
TPM1-205ENST00000357980 PPP1R18Q6NYC8 613 aa19.58■□□□□ 0.72
TPM1-205ENST00000357980 FEZ1Q99689 392 aa19.58■□□□□ 0.72
TPM1-205ENST00000357980 WDR18Q9BV38 432 aa19.58■□□□□ 0.72
TPM1-205ENST00000357980 PLA2G6O60733 806 aa19.57■□□□□ 0.72
TPM1-205ENST00000357980 USP2O75604 605 aaPredicted RBP19.57■□□□□ 0.72
TPM1-205ENST00000357980 STAT2P52630 851 aa19.57■□□□□ 0.72
TPM1-205ENST00000357980 STK38Q15208 465 aa19.57■□□□□ 0.72
TPM1-205ENST00000357980 CDC37Q16543 378 aaPredicted RBP19.57■□□□□ 0.72
TPM1-205ENST00000357980 CAVIN1Q6NZI2 390 aaKnown RBP19.57■□□□□ 0.72
TPM1-205ENST00000357980 LPAR1Q92633 364 aa19.57■□□□□ 0.72
TPM1-205ENST00000357980 COA7Q96BR5 231 aa19.57■□□□□ 0.72
TPM1-205ENST00000357980 GZF1Q9H116 711 aaPredicted RBP19.57■□□□□ 0.72
TPM1-205ENST00000357980 PICK1Q9NRD5 415 aa19.57■□□□□ 0.72
TPM1-205ENST00000357980 SMCO2A6NFE2 343 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 SPTLC2O15270 562 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 C6orf50Q9HD87 102 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 PRR12Q9ULL5 1215 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 PCDHA6Q9UN73 950 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 PCDHA8Q9Y5H6 950 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 PARP14Q460N5 1801 aa19.56■□□□□ 0.72
TPM1-205ENST00000357980 GNA11P29992 359 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 IKQ13123 557 aaPredicted RBP19.55■□□□□ 0.72
TPM1-205ENST00000357980 PIK3AP1Q6ZUJ8 805 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 PNMA8AQ86V59 439 aaPredicted RBP19.55■□□□□ 0.72
TPM1-205ENST00000357980 RASGRP4Q8TDF6 673 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 TMEM63CQ9P1W3 806 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 PCDHA7Q9UN72 937 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 PCDHB6Q9Y5E3 794 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 ME1P48163 572 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 MTMR2Q13614 643 aa19.55■□□□□ 0.72
TPM1-205ENST00000357980 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.55■□□□□ 0.72
TPM1-205ENST00000357980 PTPRFP10586 1907 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 GOLGA6L4A6NEF3 574 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 WNT7AO00755 349 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 WDR46O15213 610 aaKnown RBP19.54■□□□□ 0.72
TPM1-205ENST00000357980 TRAPPC10P48553 1259 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 TPRNQ4KMQ1 711 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 EAPPQ56P03 285 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms