RNA–Protein interactions for RNA: ENST00000357806.11

CLN3-203, Transcript of CLN3, battenin, humanhuman

TSL 1 (best) BASIC

Gene CLN3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-203ENST00000357806 SLC25A27O95847 323 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 FDX1P10109 184 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 PDHBP11177 359 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 CREB3L3Q68CJ9 461 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 CYB5R4Q7L1T6 521 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 PNMA1Q8ND90 353 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 REPS2Q8NFH8 660 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 PXYLP1Q8TE99 480 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 ANKS1AQ92625 1134 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 ZNF333Q96JL9 665 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 MROH8Q9H579 483 aa19.92■□□□□ 0.78
CLN3-203ENST00000357806 SMCHD1A6NHR9 2005 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 ZBED4O75132 1171 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 ERCC3P19447 782 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 COPB2P35606 906 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 IFIT1BQ5T764 474 aaKnown RBP19.91■□□□□ 0.78
CLN3-203ENST00000357806 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 RIOX2Q8IUF8 465 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 TEX13BQ9BXU2 312 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 SLC38A10Q9HBR0 1119 aa19.91■□□□□ 0.78
CLN3-203ENST00000357806 FRMPD3Q5JV73 1810 aa19.9■□□□□ 0.78
CLN3-203ENST00000357806 ERICH2A1L162 156 aa19.9■□□□□ 0.78
CLN3-203ENST00000357806 PTPREP23469 700 aa19.9■□□□□ 0.78
CLN3-203ENST00000357806 STAT3P40763 770 aa19.9■□□□□ 0.78
CLN3-203ENST00000357806 RGS2P41220 211 aa19.9■□□□□ 0.78
CLN3-203ENST00000357806 SART3Q15020 963 aaKnown RBP19.9■□□□□ 0.78
CLN3-203ENST00000357806 MORN1Q5T089 497 aa19.9■□□□□ 0.78
CLN3-203ENST00000357806 SLC15A5A6NIM6 579 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 ATP2A1O14983 1001 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 REC8O95072 547 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 SNHG28P0DPA3 235 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 OAZ1P54368 228 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 GRB14Q14449 540 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 SEC23AQ15436 765 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 SNRNP48Q6IEG0 339 aaKnown RBP19.89■□□□□ 0.77
CLN3-203ENST00000357806 MB21D2Q8IYB1 491 aaPredicted RBP19.89■□□□□ 0.77
CLN3-203ENST00000357806 APBA2Q99767 749 aa19.89■□□□□ 0.77
CLN3-203ENST00000357806 FRMPD2Q68DX3 1309 aaPredicted RBP19.89■□□□□ 0.77
CLN3-203ENST00000357806 STRNO43815 780 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 XRCC5P13010 732 aaKnown RBP19.88■□□□□ 0.77
CLN3-203ENST00000357806 ELNP15502 786 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 CYP2B6P20813 491 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 UBXN2AP68543 259 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 ZNF543Q08ER8 600 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 MAP2K5Q13163 448 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 GPATCH4Q5T3I0 446 aaKnown RBP19.88■□□□□ 0.77
CLN3-203ENST00000357806 CPXCR1Q8N123 301 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 USP6NLQ92738 828 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
CLN3-203ENST00000357806 PRR12Q9ULL5 1215 aa19.88■□□□□ 0.77
CLN3-203ENST00000357806 IFIT3O14879 490 aaKnown RBP19.87■□□□□ 0.77
CLN3-203ENST00000357806 BTNL9Q6UXG8 535 aa19.87■□□□□ 0.77
CLN3-203ENST00000357806 TRMT44Q8IYL2 757 aaKnown RBP19.87■□□□□ 0.77
CLN3-203ENST00000357806 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
CLN3-203ENST00000357806 HMGCRP04035 888 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 SOX10P56693 466 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 WTAPQ15007 396 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 CHST3Q7LGC8 479 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 ABRAQ8N0Z2 381 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 RAVER2Q9HCJ3 691 aaKnown RBP19.86■□□□□ 0.77
CLN3-203ENST00000357806 KIAA0100Q14667 2235 aaKnown RBP19.86■□□□□ 0.77
CLN3-203ENST00000357806 INHAP05111 366 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 FCER1AP12319 257 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 ZKSCAN1P17029 563 aaPredicted RBP19.86■□□□□ 0.77
CLN3-203ENST00000357806 ADORA2AP29274 412 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 MCM5P33992 734 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 ANTXR2P58335 489 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 ASPRV1Q53RT3 343 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 SYDE2Q5VT97 1194 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 TTBK2Q6IQ55 1244 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 MTA3Q9BTC8 594 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 LCTP09848 1927 aa19.86■□□□□ 0.77
CLN3-203ENST00000357806 MCM3APO60318 1980 aa19.85■□□□□ 0.77
CLN3-203ENST00000357806 SLC16A2P36021 539 aa19.85■□□□□ 0.77
CLN3-203ENST00000357806 TMEM67Q5HYA8 995 aa19.85■□□□□ 0.77
CLN3-203ENST00000357806 TRIB2Q92519 343 aa19.85■□□□□ 0.77
CLN3-203ENST00000357806 MMP19Q99542 508 aa19.85■□□□□ 0.77
CLN3-203ENST00000357806 TMEM106CQ9BVX2 250 aa19.85■□□□□ 0.77
CLN3-203ENST00000357806 RANBP17Q9H2T7 1088 aaKnown RBP19.85■□□□□ 0.77
CLN3-203ENST00000357806 PRC1O43663 620 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 MYCP01106 439 aaPredicted RBP19.84■□□□□ 0.77
CLN3-203ENST00000357806 HOXC6P09630 235 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 PARP1P09874 1014 aaKnown RBP19.84■□□□□ 0.77
CLN3-203ENST00000357806 SLC4A3P48751 1232 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 KRT32Q14532 448 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 KCTD2Q14681 263 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 DPP9Q86TI2 863 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 TMEM87BQ96K49 555 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 SLC5A4Q9NY91 659 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 RIPK3Q9Y572 518 aa19.84■□□□□ 0.77
CLN3-203ENST00000357806 ZNF536O15090 1300 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 EPB41L2O43491 1005 aaKnown RBP19.83■□□□□ 0.76
CLN3-203ENST00000357806 GOLGA8HP0CJ92 632 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 MTFR1Q15390 333 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 TSGA10IPQ3SY00 556 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 CCDC174Q6PII3 467 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 CHST13Q8NET6 341 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 FBXO40Q9UH90 709 aa19.83■□□□□ 0.76
CLN3-203ENST00000357806 CCL5P13501 91 aa19.82■□□□□ 0.76
CLN3-203ENST00000357806 HSPA4P34932 840 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms