RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NONOQ15233 471 aaKnown RBP eCLIP14.06□□□□□ -0.162e-8■■■■■ 98.1
SMC4-202ENST00000357388 TM6SF1Q9BZW5 370 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 NT5C3AQ9H0P0 336 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 KIAA1468Q9P260 1216 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 GOLGA8CPA6NN73 597 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 MYCLP12524 364 aaPredicted RBP14.06□□□□□ -0.16
SMC4-202ENST00000357388 PDZD4Q76G19 769 aaPredicted RBP14.06□□□□□ -0.16
SMC4-202ENST00000357388 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 LRWD1Q9UFC0 647 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 CHMP2AO43633 222 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 ALS2CLQ60I27 953 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 CHST3Q7LGC8 479 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 TBC1D22AQ8WUA7 517 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 AS3MTQ9HBK9 375 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
SMC4-202ENST00000357388 TNFAIP1Q13829 316 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 EIF4A2Q14240 407 aaKnown RBP14.06□□□□□ -0.16
SMC4-202ENST00000357388 ARHGAP18Q8N392 663 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 RTEL1Q9NZ71 1219 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 DNM3Q9UQ16 869 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 CCNT1O60563 726 aaKnown RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 ICE2Q659A1 982 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 PNMA2Q9UL42 364 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 PA2G4Q9UQ80 394 aaKnown RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 H7C1D1 291 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 PDE8AO60658 829 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 STX1BP61266 288 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 SMCR8Q8TEV9 937 aaPredicted RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 LSM14BQ9BX40 385 aaKnown RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 EXOC3O60645 756 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 SLC1A4P43007 532 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 BAG6P46379 1132 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 PABPC4Q13310 644 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■■■ 455.6
SMC4-202ENST00000357388 U2AF1L4Q8WU68 220 aaKnown RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 GDAP1L1Q96MZ0 367 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 CSRNP1Q96S65 589 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 JPH2Q9BR39 696 aaPredicted RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 CCDC151A5D8V7 595 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 MAN1A2O60476 641 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 ALDH1B1P30837 517 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 VPS41P49754 854 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 HERC4Q5GLZ8 1057 aaPredicted RBP14.05□□□□□ -0.16
SMC4-202ENST00000357388 SCYL3Q8IZE3 742 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 SNX29Q8TEQ0 813 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 SERPINI1Q99574 410 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 TMEM63CQ9P1W3 806 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 TOP2BQ02880 1626 aa14.05□□□□□ -0.16
SMC4-202ENST00000357388 GPC4O75487 556 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 ADKP55263 362 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 E2F5Q15329 346 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 KRT80Q6KB66 452 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 NBPF10Q6P3W6 841 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 CABP7Q86V35 215 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 TCP11Q8WWU5 503 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 GFM2Q969S9 779 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 EYA2O00167 538 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 ADCY7P51828 1080 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 PLBD2Q8NHP8 589 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 TRIM56Q9BRZ2 755 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 CSADQ9Y600 493 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 BZW2Q9Y6E2 419 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 TRPM2O94759 1503 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 CHUKO15111 745 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 TTI1O43156 1089 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 GCP02774 474 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 GRAMD4Q6IC98 578 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 HOXA7P31268 230 aaPredicted RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 RNMTO43148 476 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 ZFXP17010 805 aaPredicted RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 MORC3Q14149 939 aa14.04□□□□□ -0.16
SMC4-202ENST00000357388 MTHFSDQ2M296 383 aaKnown RBP14.04□□□□□ -0.16
SMC4-202ENST00000357388 PRPF6O94906 941 aaKnown RBP14.03□□□□□ -0.16
SMC4-202ENST00000357388 EIF3BP55884 814 aaKnown RBP14.03□□□□□ -0.16
SMC4-202ENST00000357388 DTNBP1Q96EV8 351 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 BTG4Q9NY30 223 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 ARHGEF9O43307 516 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 DLGAP5Q15398 846 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 ZNF449Q6P9G9 518 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 SGSM2O43147 1006 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 SEC24BO95487 1268 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 HSPA6P17066 643 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 OCA2Q04671 838 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 PPP2R5DQ14738 602 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 GNPTABQ3T906 1256 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 NSMFQ6X4W1 530 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 OTUD6AQ7L8S5 288 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
SMC4-202ENST00000357388 PPP1R13BQ96KQ4 1090 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms