RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 RASGRP2Q7LDG7 609 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 FOXP1Q9H334 677 aaPredicted RBP13.98□□□□□ -0.17
BDNF-202ENST00000356660 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
BDNF-202ENST00000356660 AXIN2Q9Y2T1 843 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 SMIM23A6NLE4 172 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 PDE4DQ08499 809 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 PRPF4BQ13523 1007 aaKnown RBP13.98□□□□□ -0.17
BDNF-202ENST00000356660 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 CCDC40Q4G0X9 1142 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 HNRNPLLQ8WVV9 542 aaKnown RBP13.98□□□□□ -0.17
BDNF-202ENST00000356660 FERMT2Q96AC1 680 aa13.98□□□□□ -0.17
BDNF-202ENST00000356660 FBXO2Q9UK22 296 aaPredicted RBP13.98□□□□□ -0.17
BDNF-202ENST00000356660 FRMD3A2A2Y4 597 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 FANCGO15287 622 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 BAG3O95817 575 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 KIF5BP33176 963 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 CPLX4Q7Z7G2 160 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 RPAINQ86UA6 219 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 RPGRIP1Q96KN7 1286 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.97□□□□□ -0.17
BDNF-202ENST00000356660 CEMIPQ8WUJ3 1361 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 SALL1Q9NSC2 1324 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 MAGEB6P1A0A0J9YX57 407 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 MCAMP43121 646 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 PRM3Q9NNZ6 103 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 RBM28Q9NW13 759 aaKnown RBP13.97□□□□□ -0.17
BDNF-202ENST00000356660 MAP2K7O14733 419 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 RPN1P04843 607 aaKnown RBP13.97□□□□□ -0.17
BDNF-202ENST00000356660 TSPY3P0CV98 308 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 ADD2P35612 726 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 CUL4BQ13620 913 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 FAM114A1Q8IWE2 563 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 SMCR8Q8TEV9 937 aaPredicted RBP13.97□□□□□ -0.17
BDNF-202ENST00000356660 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 EHD4Q9H223 541 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 CXorf56Q9H5V9 222 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 GPR108Q9NPR9 543 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.97□□□□□ -0.17
BDNF-202ENST00000356660 LRWD1Q9UFC0 647 aa13.97□□□□□ -0.17
BDNF-202ENST00000356660 TLDC2A0PJX2 215 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 PYM1Q9BRP8 204 aaKnown RBP13.96□□□□□ -0.17
BDNF-202ENST00000356660 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
BDNF-202ENST00000356660 ANKRD26Q9UPS8 1709 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 TNKSO95271 1327 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 GUCY2DQ02846 1103 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 NAA25Q14CX7 972 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 RRAGAQ7L523 313 aa13.96□□□□□ -0.17
BDNF-202ENST00000356660 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.18
BDNF-202ENST00000356660 ERVK-24P63145 666 aa13.96□□□□□ -0.18
BDNF-202ENST00000356660 TCP11X2Q5H9J9 407 aa13.96□□□□□ -0.18
BDNF-202ENST00000356660 CEP85LQ5SZL2 805 aa13.96□□□□□ -0.18
BDNF-202ENST00000356660 TMEM139Q8IV31 216 aa13.96□□□□□ -0.18
BDNF-202ENST00000356660 CABS1Q96KC9 395 aa13.96□□□□□ -0.18
BDNF-202ENST00000356660 RIMS1Q86UR5 1692 aaKnown RBP13.96□□□□□ -0.18
BDNF-202ENST00000356660 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 EZRP15311 586 aaKnown RBP13.95□□□□□ -0.18
BDNF-202ENST00000356660 E2F5Q15329 346 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
BDNF-202ENST00000356660 UBLCP1Q8WVY7 318 aaPredicted RBP13.95□□□□□ -0.18
BDNF-202ENST00000356660 LY9Q9HBG7 655 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 TFCP2L1Q9NZI6 479 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 HPCAL4Q9UM19 191 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 ESYT3A0FGR9 886 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 H7C1W4 665 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 MOCS3O95396 460 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 FOXO4P98177 505 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 KRT26Q7Z3Y9 468 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 MSANTD4Q8NCY6 345 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 HSD3B7Q9H2F3 369 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 GREM2Q9H772 168 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 GOLGA8KD6RF30 607 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 H7C1D1 291 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 LDHCP07864 332 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 IRAK1P51617 712 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 TBX2Q13207 712 aaPredicted RBP13.95□□□□□ -0.18
BDNF-202ENST00000356660 FAM184BQ9ULE4 1060 aa13.95□□□□□ -0.18
BDNF-202ENST00000356660 ARHGAP25P42331 645 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 NNTQ13423 1086 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 IFT20Q8IY31 132 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 RASGRP4Q8TDF6 673 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 TRIM58Q8NG06 486 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 NHEJ1Q9H9Q4 299 aaPredicted RBP13.94□□□□□ -0.18
BDNF-202ENST00000356660 EPB41L5Q9HCM4 733 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
BDNF-202ENST00000356660 UTYO14607 1347 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms