RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 IKQ13123 557 aaPredicted RBP18.64■□□□□ 0.57
FDPS-201ENST00000356657 NUP88Q99567 741 aaPredicted RBP18.64■□□□□ 0.57
FDPS-201ENST00000356657 KIF2CQ99661 725 aa18.64■□□□□ 0.57
FDPS-201ENST00000356657 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
FDPS-201ENST00000356657 KLF18A0A0U1RQI7 1052 aa18.63■□□□□ 0.57
FDPS-201ENST00000356657 PALM3A6NDB9 673 aaPredicted RBP18.63■□□□□ 0.57
FDPS-201ENST00000356657 ST18O60284 1047 aa18.63■□□□□ 0.57
FDPS-201ENST00000356657 COPB2P35606 906 aa18.63■□□□□ 0.57
FDPS-201ENST00000356657 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
FDPS-201ENST00000356657 KCTD1Q719H9 257 aa18.63■□□□□ 0.57
FDPS-201ENST00000356657 CHMP4CQ96CF2 233 aa18.63■□□□□ 0.57
FDPS-201ENST00000356657 ZNF274Q96GC6 653 aaPredicted RBP18.63■□□□□ 0.57
FDPS-201ENST00000356657 P2RX7Q99572 595 aaKnown RBP18.63■□□□□ 0.57
FDPS-201ENST00000356657 GPHNQ9NQX3 736 aaPredicted RBP18.63■□□□□ 0.57
FDPS-201ENST00000356657 MORF4L1Q9UBU8 362 aa18.63■□□□□ 0.57
FDPS-201ENST00000356657 COL11A1P12107 1806 aaPredicted RBP18.62■□□□□ 0.57
FDPS-201ENST00000356657 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 TBC1D8O95759 1140 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 BCRP11274 1271 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 CCNA1P78396 465 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 C17orf99Q6UX52 265 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 MICU3Q86XE3 530 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 FANCBQ8NB91 859 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 MAD2L2Q9UI95 211 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 MTMR7Q9Y216 660 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 MYH6P13533 1939 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 CASP8AP2Q9UKL3 1982 aa18.62■□□□□ 0.57
FDPS-201ENST00000356657 GOLGA8BA8MQT2 603 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 KLRF2D3W0D1 207 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 VWA5AO00534 786 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 ZBED4O75132 1171 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 TRAF1Q13077 416 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 SYDE2Q5VT97 1194 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 SLC38A10Q9HBR0 1119 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
FDPS-201ENST00000356657 CTDP1Q9Y5B0 961 aaPredicted RBP18.61■□□□□ 0.57
FDPS-201ENST00000356657 FRMPD2Q68DX3 1309 aaPredicted RBP18.61■□□□□ 0.57
FDPS-201ENST00000356657 MCM2P49736 904 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 METAP2P50579 478 aaKnown RBP eCLIP18.6■□□□□ 0.57
FDPS-201ENST00000356657 APOBRQ0VD83 1088 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 RTN1Q16799 776 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 ATG4CQ96DT6 458 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 SPZ1Q9BXG8 430 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 GPCPD1Q9NPB8 672 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 PRR12Q9ULL5 1215 aa18.6■□□□□ 0.57
FDPS-201ENST00000356657 GOLGA8AA7E2F4 631 aa18.59■□□□□ 0.57
FDPS-201ENST00000356657 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
FDPS-201ENST00000356657 AK2P54819 239 aa18.59■□□□□ 0.57
FDPS-201ENST00000356657 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
FDPS-201ENST00000356657 ERVK-24P63145 666 aa18.59■□□□□ 0.57
FDPS-201ENST00000356657 ARHGEF6Q15052 776 aa18.59■□□□□ 0.57
FDPS-201ENST00000356657 TEX13BQ9BXU2 312 aa18.59■□□□□ 0.57
FDPS-201ENST00000356657 RANBP17Q9H2T7 1088 aaKnown RBP18.59■□□□□ 0.57
FDPS-201ENST00000356657 GPR25O00155 361 aa18.58■□□□□ 0.57
FDPS-201ENST00000356657 SP3Q02447 781 aa18.58■□□□□ 0.57
FDPS-201ENST00000356657 RASGRP2Q7LDG7 609 aa18.58■□□□□ 0.57
FDPS-201ENST00000356657 SHCBP1Q8NEM2 672 aa18.58■□□□□ 0.57
FDPS-201ENST00000356657 RBM27Q9P2N5 1060 aaKnown RBP18.58■□□□□ 0.57
FDPS-201ENST00000356657 RBPJLQ9UBG7 517 aa18.58■□□□□ 0.57
FDPS-201ENST00000356657 SLC25A27O95847 323 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 GOLGA8HP0CJ92 632 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 PDIA3P30101 505 aaKnown RBP18.58■□□□□ 0.56
FDPS-201ENST00000356657 KIF22Q14807 665 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 TTBK2Q6IQ55 1244 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 CPLX2Q6PUV4 134 aaKnown RBP18.58■□□□□ 0.56
FDPS-201ENST00000356657 TMTC3Q6ZXV5 915 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 STAG2Q8N3U4 1231 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 ANKRD13CQ8N6S4 541 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 REPS2Q8NFH8 660 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 MYL10Q9BUA6 226 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 MAF1Q9H063 256 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 RIOX1Q9H6W3 641 aa18.58■□□□□ 0.56
FDPS-201ENST00000356657 ZNF214Q9UL59 606 aaPredicted RBP18.58■□□□□ 0.56
FDPS-201ENST00000356657 NAP1L2Q9ULW6 460 aaPredicted RBP18.58■□□□□ 0.56
FDPS-201ENST00000356657 MGAMO43451 1857 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 FKTNO75072 461 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 GNRH1P01148 92 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 MAPK4P31152 587 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 TKFCQ3LXA3 575 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 ADGRF4Q8IZF3 695 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 MTMR8Q96EF0 704 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 ZSCAN31Q96LW9 406 aaPredicted RBP18.57■□□□□ 0.56
FDPS-201ENST00000356657 PAGR1Q9BTK6 254 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 SPATC1LQ9H0A9 340 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 CPA4Q9UI42 421 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 LIMCH1Q9UPQ0 1083 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
FDPS-201ENST00000356657 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
FDPS-201ENST00000356657 CDKL5O76039 1030 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 ICAM1P05362 532 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 SLC16A2P36021 539 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 STAT3P40763 770 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 RIOX2Q8IUF8 465 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 MROH8Q9H579 483 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 TXNRD2Q9NNW7 524 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms