RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.33
VAT1-201ENST00000355653 RPGRIP1Q96KN7 1286 aa17.08■□□□□ 0.33
VAT1-201ENST00000355653 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.33
VAT1-201ENST00000355653 LRP6O75581 1613 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 SHTN1A0MZ66 631 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 SMIM22K7EJ46 135 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
VAT1-201ENST00000355653 DNAJC7Q99615 494 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 NID2Q14112 1375 aa17.08■□□□□ 0.32
VAT1-201ENST00000355653 GTPBP6O43824 516 aaPredicted RBP17.07■□□□□ 0.32
VAT1-201ENST00000355653 TRIM21P19474 475 aaKnown RBP17.07■□□□□ 0.32
VAT1-201ENST00000355653 SLC7A5Q01650 507 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 CCDC70Q6NSX1 233 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
VAT1-201ENST00000355653 ZNF512BQ96KM6 892 aaPredicted RBP17.07■□□□□ 0.32
VAT1-201ENST00000355653 PSMB7Q99436 277 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 CHD4Q14839 1912 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 B4DLN1 442 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
VAT1-201ENST00000355653 KLK7P49862 253 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 PMS1P54277 932 aaKnown RBP17.07■□□□□ 0.32
VAT1-201ENST00000355653 PPFIA1Q13136 1202 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 RASGRF1Q13972 1273 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 PIK3AP1Q6ZUJ8 805 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 RASSF8Q8NHQ8 419 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 FAM184BQ9ULE4 1060 aa17.07■□□□□ 0.32
VAT1-201ENST00000355653 LGALS16A8MUM7 142 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 MNAT1P51948 309 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 GPIHBP1Q8IV16 184 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 TRIM47Q96LD4 638 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 NHEJ1Q9H9Q4 299 aaPredicted RBP17.06■□□□□ 0.32
VAT1-201ENST00000355653 ZNHIT6Q9NWK9 470 aaKnown RBP17.06■□□□□ 0.32
VAT1-201ENST00000355653 MYH6P13533 1939 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 BMP15O95972 392 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
VAT1-201ENST00000355653 MYCBPQ99417 103 aaPredicted RBP17.06■□□□□ 0.32
VAT1-201ENST00000355653 NCAPGQ9BPX3 1015 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 LRRC1Q9BTT6 524 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 CAPN11Q9UMQ6 739 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 BCL9LQ86UU0 1499 aa17.06■□□□□ 0.32
VAT1-201ENST00000355653 H7C1D1 291 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 CTSWP56202 376 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 ATP2C1P98194 919 aaPredicted RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 IQCEQ6IPM2 695 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 SUGP1Q8IWZ8 645 aaKnown RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 SDR42E1Q8WUS8 393 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 POLD4Q9HCU8 107 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 RMND1Q9NWS8 449 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 MAGEC2Q9UBF1 373 aaPredicted RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 DMGDHQ9UI17 866 aaKnown RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 BAZ2BQ9UIF8 2168 aaKnown RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 EIF3HO15372 352 aaKnown RBP eCLIP17.05■□□□□ 0.32
VAT1-201ENST00000355653 CCDC96Q2M329 555 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 AENQ8WTP8 325 aaKnown RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 PLIN2Q99541 437 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 SMARCAL1Q9NZC9 954 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 INPP5BP32019 993 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 STAT6P42226 847 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 HLFQ16534 295 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 IL17AQ16552 155 aa17.05■□□□□ 0.32
VAT1-201ENST00000355653 SECISBP2LQ93073 1101 aaKnown RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
VAT1-201ENST00000355653 PARP4Q9UKK3 1724 aaKnown RBP17.04■□□□□ 0.32
VAT1-201ENST00000355653 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
VAT1-201ENST00000355653 KIF5AQ12840 1032 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 PUM3Q15397 648 aaKnown RBP17.04■□□□□ 0.32
VAT1-201ENST00000355653 LRWD1Q9UFC0 647 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 CXCR5P32302 372 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 DNAJC10Q8IXB1 793 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 ENAHQ8N8S7 591 aaPredicted RBP17.04■□□□□ 0.32
VAT1-201ENST00000355653 EHD2Q9NZN4 543 aa17.04■□□□□ 0.32
VAT1-201ENST00000355653 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 HNRNPH1P31943 449 aaKnown RBP17.03■□□□□ 0.32
VAT1-201ENST00000355653 PDCLQ13371 301 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
VAT1-201ENST00000355653 KCTD16Q68DU8 428 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 LPIN2Q92539 896 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 ESR2Q92731 530 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 ARL8AQ96BM9 186 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 ATP1A2P50993 1020 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 CATIPQ7Z7H3 387 aa17.03■□□□□ 0.32
VAT1-201ENST00000355653 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms