RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 PANX2Q96RD6 677 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 XAB2Q9HCS7 855 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 TRAPPC8Q9Y2L5 1435 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ERBB4Q15303 1308 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 TCOF1Q13428 1488 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 DTNBO60941 627 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 RPN1P04843 607 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 LDHBP07195 334 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 EEF1GP26641 437 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 ADCY7P51828 1080 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 DPCR1Q3MIW9 517 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 MRPL44Q9H9J2 332 aaKnown RBP13.94□□□□□ -0.18
SYNCRIP-201ENST00000355238 B4DLN1 442 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ABCB4P21439 1286 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 SARM1Q6SZW1 724 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 PCDHA5Q9Y5H7 936 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZBTB21Q9ULJ3 1066 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 DYNC1I2Q13409 638 aaKnown RBP13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ST13P4Q8IZP2 240 aaPredicted RBP13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 CC2D1AQ6P1N0 951 aaPredicted RBP13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ANKRD2Q9GZV1 360 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 MAGEF1Q9HAY2 307 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 TBC1D7Q9P0N9 293 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 CLIC4Q9Y696 253 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ITSN2Q9NZM3 1697 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 GOLGA8QA0A0J9YX86 632 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 GOLGA8OA6NCC3 632 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 GOLGA8NF8WBI6 632 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZMYND10O75800 440 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 SLC8A3P57103 927 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 SLC39A14Q15043 492 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ARHGAP44Q17R89 818 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 NBPF10Q6P3W6 841 aaKnown RBP13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 OGFOD1Q8N543 542 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 UHMK1Q8TAS1 419 aaKnown RBP13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 HAUS1Q96CS2 278 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 ABCC1P33527 1531 aa13.93□□□□□ -0.18
SYNCRIP-201ENST00000355238 MYCT1Q8N699 235 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 POLR2FP61218 127 aaKnown RBP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 TMCO4Q5TGY1 634 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 C19orf44Q9H6X5 657 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 PHEXP78562 749 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 CXorf38Q8TB03 319 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 SCINQ9Y6U3 715 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 RASSF7Q02833 373 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 C2orf54Q08AI8 447 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 STRN3Q13033 797 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 PPP1R1BQ9UD71 204 aaPredicted RBP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 ARMCX3Q9UH62 379 aaPredicted RBP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 PGRMC1O00264 195 aaKnown RBP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 DKC1O60832 514 aaKnown RBP eCLIP13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 LMNB2Q03252 620 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 TMED1Q13445 227 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 EYA1Q99502 592 aa13.92□□□□□ -0.18
SYNCRIP-201ENST00000355238 N4BP1O75113 896 aaKnown RBP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 MORC4Q8TE76 937 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 PBKQ96KB5 322 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 METTL14Q9HCE5 456 aaKnown RBP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 PLCH2O75038 1416 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 USP19O94966 1318 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 DAPK3O43293 454 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 SLC12A2P55011 1212 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 RPS6KA2Q15349 733 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 LSG1Q9H089 658 aaKnown RBP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 CD2BP2O95400 341 aaKnown RBP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 IFNB1P01574 187 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 KRT3P12035 628 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 PDLIM2Q96JY6 352 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 RCOR1Q9UKL0 485 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 SDCCAG3Q96C92 435 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 TUBGCP2Q9BSJ2 902 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 EPS15L1Q9UBC2 864 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 ADCY9O60503 1353 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 MX2P20592 715 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 IL13P35225 146 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 YY1AP1Q9H869 796 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
SYNCRIP-201ENST00000355238 SUCLG2Q96I99 432 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 HINFPQ9BQA5 517 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 HSPA6P17066 643 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms