RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 EARS2Q5JPH6 523 aaKnown RBP23.58■■□□□ 1.37
TRIM4-202ENST00000354241 CCDC84Q86UT8 332 aaPredicted RBP23.58■■□□□ 1.37
TRIM4-202ENST00000354241 SPICE1Q8N0Z3 855 aa23.58■■□□□ 1.37
TRIM4-202ENST00000354241 TNFRSF25Q93038 417 aa23.58■■□□□ 1.37
TRIM4-202ENST00000354241 PPP2R3BQ9Y5P8 575 aa23.58■■□□□ 1.37
TRIM4-202ENST00000354241 USP17L10C9JJH3 530 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 ADAMTS3O15072 1205 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 GRIN3BO60391 1043 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 BMP3P12645 472 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 ATP2B1P20020 1258 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 ZSCAN23Q3MJ62 389 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 ZNF341Q9BYN7 854 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 PNMA6FA0A0J9YX94 578 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 IKQ13123 557 aaPredicted RBP23.57■■□□□ 1.36
TRIM4-202ENST00000354241 SLC39A14Q15043 492 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 SH2D4AQ9H788 454 aa23.57■■□□□ 1.36
TRIM4-202ENST00000354241 DOCK1Q14185 1865 aa23.56■■□□□ 1.36
TRIM4-202ENST00000354241 hCG_1984214I3L0E3 225 aa23.56■■□□□ 1.36
TRIM4-202ENST00000354241 CTNND1O60716 968 aaKnown RBP23.56■■□□□ 1.36
TRIM4-202ENST00000354241 LIG1P18858 919 aa23.56■■□□□ 1.36
TRIM4-202ENST00000354241 ZYXQ15942 572 aaKnown RBP23.56■■□□□ 1.36
TRIM4-202ENST00000354241 NOM1Q5C9Z4 860 aaKnown RBP23.56■■□□□ 1.36
TRIM4-202ENST00000354241 GALNT17Q6IS24 598 aa23.56■■□□□ 1.36
TRIM4-202ENST00000354241 FAM177A1Q8N128 213 aaPredicted RBP23.56■■□□□ 1.36
TRIM4-202ENST00000354241 ZNF713Q8N859 430 aaPredicted RBP23.56■■□□□ 1.36
TRIM4-202ENST00000354241 NOL7Q9UMY1 257 aaKnown RBP23.56■■□□□ 1.36
TRIM4-202ENST00000354241 PCDHA7Q9UN72 937 aa23.56■■□□□ 1.36
TRIM4-202ENST00000354241 PITPNM2Q9BZ72 1349 aa23.56■■□□□ 1.36
TRIM4-202ENST00000354241 TMEM232C9JQI7 657 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 PIK3AP1Q6ZUJ8 805 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 DAGLBQ8NCG7 672 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 COA7Q96BR5 231 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 GLIS2Q9BZE0 524 aaPredicted RBP23.55■■□□□ 1.36
TRIM4-202ENST00000354241 SMCO2A6NFE2 343 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 ZBTB5O15062 677 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 INPP5BP32019 993 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 PTPAQ15257 358 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 KIAA1755Q5JYT7 1200 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 RASGRP4Q8TDF6 673 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 ZMYND12Q9H0C1 365 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 C6orf50Q9HD87 102 aa23.55■■□□□ 1.36
TRIM4-202ENST00000354241 SRCAPQ6ZRS2 3230 aa23.54■■□□□ 1.36
TRIM4-202ENST00000354241 MARCKSP29966 332 aaPredicted RBP23.54■■□□□ 1.36
TRIM4-202ENST00000354241 DCPSQ96C86 337 aaKnown RBP23.54■■□□□ 1.36
TRIM4-202ENST00000354241 MTMR8Q96EF0 704 aa23.54■■□□□ 1.36
TRIM4-202ENST00000354241 FEZ1Q99689 392 aa23.54■■□□□ 1.36
TRIM4-202ENST00000354241 VCPKMTQ9H867 229 aa23.54■■□□□ 1.36
TRIM4-202ENST00000354241 GINM1Q9NU53 330 aa23.54■■□□□ 1.36
TRIM4-202ENST00000354241 PCDHB6Q9Y5E3 794 aa23.54■■□□□ 1.36
TRIM4-202ENST00000354241 CCDC183Q5T5S1 534 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 CCAR1Q8IX12 1150 aaKnown RBP23.53■■□□□ 1.36
TRIM4-202ENST00000354241 L3MBTL3Q96JM7 780 aaPredicted RBP23.53■■□□□ 1.36
TRIM4-202ENST00000354241 FZD1Q9UP38 647 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 PPP1R11O60927 126 aaPredicted RBP23.53■■□□□ 1.36
TRIM4-202ENST00000354241 GNA11P29992 359 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 CDC37Q16543 378 aaPredicted RBP23.53■■□□□ 1.36
TRIM4-202ENST00000354241 FAM83BQ5T0W9 1011 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 SYDE2Q5VT97 1194 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 WRNIP1Q96S55 665 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 PCDHA6Q9UN73 950 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 PCDHA8Q9Y5H6 950 aa23.53■■□□□ 1.36
TRIM4-202ENST00000354241 PPP6R2O75170 966 aa23.52■■□□□ 1.36
TRIM4-202ENST00000354241 QRICH1Q2TAL8 776 aa23.52■■□□□ 1.36
TRIM4-202ENST00000354241 ADALQ6DHV7 355 aa23.52■■□□□ 1.36
TRIM4-202ENST00000354241 ZC3H4Q9UPT8 1303 aaKnown RBP23.52■■□□□ 1.36
TRIM4-202ENST00000354241 CCDC194A0A1B0GVG4 234 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 TRIM75PA6NK02 468 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 M0R2N6 131 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 SUPT20HL1Q3ZLR7 823 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 ZNF112Q9UJU3 913 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 CEP131Q9UPN4 1083 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 SSC5DA1L4H1 1573 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 ESYT2A0FGR8 921 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 SYCE3A1L190 88 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 GLTPD2A6NH11 291 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 EPHX2P34913 555 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 PPP1R18Q6NYC8 613 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 BTNL9Q6UXG8 535 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 SULF1Q8IWU6 871 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 FSIP1Q8NA03 581 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 DACT1Q9NYF0 836 aa23.51■■□□□ 1.35
TRIM4-202ENST00000354241 STAT2P52630 851 aa23.5■■□□□ 1.35
TRIM4-202ENST00000354241 SNAP25P60880 206 aa23.5■■□□□ 1.35
TRIM4-202ENST00000354241 TTC38Q5R3I4 469 aa23.5■■□□□ 1.35
TRIM4-202ENST00000354241 SCYL3Q8IZE3 742 aa23.5■■□□□ 1.35
TRIM4-202ENST00000354241 ZKSCAN4Q969J2 545 aaPredicted RBP23.5■■□□□ 1.35
TRIM4-202ENST00000354241 GOLPH3LQ9H4A5 285 aa23.5■■□□□ 1.35
TRIM4-202ENST00000354241 A0A1W2PQ27 194 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 A0A1W2PQ64 194 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 A0A1W2PQD8 194 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 ADM5C9JUS6 153 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 NR1I2O75469 434 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 ADCY7P51828 1080 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 ZNF445P59923 1031 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 PRKG1Q13976 671 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 CCDC73Q6ZRK6 1079 aa23.49■■□□□ 1.35
TRIM4-202ENST00000354241 USP50Q70EL3 339 aaPredicted RBP23.49■■□□□ 1.35
TRIM4-202ENST00000354241 MRPS27Q92552 414 aaKnown RBP23.49■■□□□ 1.35
TRIM4-202ENST00000354241 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms