RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PRMT6Q96LA8 375 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-203ENST00000350034 CSRNP2Q9H175 543 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 COL4A5P29400 1685 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 KIF13BQ9NQT8 1826 aa7.91□□□□□ -1.14
TRIM55-203ENST00000350034 SIPA1L1O43166 1804 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 A0A087WWV3 80 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 SPDYE2BA6NHP3 402 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 PSMD14O00487 310 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 SPDYE6P0CI01 402 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ATP2B1P20020 1258 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 RGS19P49795 217 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF75DP51815 510 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 PTGDRQ13258 359 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 IL17AQ16552 155 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 DPCR1Q3MIW9 517 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 SPECC1Q5M775 1068 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 GPATCH4Q5T3I0 446 aaKnown RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 FKBP1CQ5VVH2 108 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 HEATR3Q7Z4Q2 680 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 PLA2G4DQ86XP0 818 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 CLEC10AQ8IUN9 316 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 SIAH1Q8IUQ4 282 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 LRRC47Q8N1G4 583 aaKnown RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 MTMR14Q8NCE2 650 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 CNNM3Q8NE01 707 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 SPATA20Q8TB22 786 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 CCDC12Q8WUD4 166 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 PIBF1Q8WXW3 757 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ERCC4Q92889 916 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ZBED3Q96IU2 234 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 PIGSQ96S52 555 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 NAT10Q9H0A0 1025 aaKnown RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 CPVLQ9H3G5 476 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 TDRD3Q9H7E2 651 aaKnown RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 KANSL2Q9H9L4 492 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF277Q9NRM2 450 aaPredicted RBP7.9□□□□□ -1.14
TRIM55-203ENST00000350034 CLIP2Q9UDT6 1046 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ZNRF3Q9ULT6 936 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 ZKSCAN5Q9Y2L8 839 aa7.9□□□□□ -1.14
TRIM55-203ENST00000350034 FRMPD2Q68DX3 1309 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-203ENST00000350034 A0A087X0B3 334 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 ZNF500O60304 480 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-203ENST00000350034 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 GNA11P29992 359 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 CDC25BP30305 580 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 PRPHP41219 470 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 PTGER2P43116 358 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 RBM5P52756 815 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRIM55-203ENST00000350034 TCP10Q12799 353 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 ORC2Q13416 577 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-203ENST00000350034 NCAPHQ15003 741 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 E2F4Q16254 413 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 GPR162Q16538 588 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 CERKLQ49MI3 558 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-203ENST00000350034 KANK3Q6NY19 840 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 PPP1R18Q6NYC8 613 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 TMEM179Q6ZVK1 233 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 KRT25Q7Z3Z0 450 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 LARGE2Q8N3Y3 721 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 AGBL3Q8NEM8 1001 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 RASGRP4Q8TDF6 673 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 DCAF4Q8WV16 495 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 UBA5Q9GZZ9 404 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 MTFR1LQ9H019 292 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 JMJD4Q9H9V9 463 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 C6orf50Q9HD87 102 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 PIM2Q9P1W9 311 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 ZNF70Q9UC06 446 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-203ENST00000350034 SERTAD1Q9UHV2 236 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 PCDHA5Q9Y5H7 936 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 PSME4Q14997 1843 aa7.89□□□□□ -1.15
TRIM55-203ENST00000350034 MYH6P13533 1939 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 PNMA6FA0A0J9YX94 578 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 CCDC194A0A1B0GVG4 234 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 SMCO2A6NFE2 343 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 LAD1O00515 517 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 IKBKBO14920 756 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 FOXN1O15353 648 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 POLR2DO15514 142 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 PPP1R11O60927 126 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 RAD17O75943 681 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 TPM3P06753 285 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 SLFN14P0C7P3 912 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 EEF2P13639 858 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 BMP6P22004 513 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 MCM7P33993 719 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 LONP1P36776 959 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 MMP14P50281 582 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 NAPAP54920 295 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 EIF6P56537 245 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 JAG1P78504 1218 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 PNOCQ13519 176 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 RRP1BQ14684 758 aaKnown RBP7.88□□□□□ -1.15
TRIM55-203ENST00000350034 SEPT2Q15019 361 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 POSTNQ15063 836 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 TTBK2Q6IQ55 1244 aa7.88□□□□□ -1.15
TRIM55-203ENST00000350034 NIM1KQ8IY84 436 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms