RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PDLIM2Q96JY6 352 aa6.69□□□□□ -1.34
RFC1-201ENST00000349703 STK31Q9BXU1 1019 aa6.69□□□□□ -1.34
RFC1-201ENST00000349703 PRDM5Q9NQX1 630 aaPredicted RBP6.69□□□□□ -1.34
RFC1-201ENST00000349703 UBP1Q9NZI7 540 aa6.69□□□□□ -1.34
RFC1-201ENST00000349703 SWAP70Q9UH65 585 aa6.69□□□□□ -1.34
RFC1-201ENST00000349703 EVC2Q86UK5 1308 aa6.69□□□□□ -1.34
RFC1-201ENST00000349703 NSD2O96028 1365 aa6.69□□□□□ -1.34
RFC1-201ENST00000349703 NBNO60934 754 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 TRIM27P14373 513 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 ZSCAN20P17040 1043 aaPredicted RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 ZBTB16Q05516 673 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 ZNF697Q5TEC3 545 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 MMS22LQ6ZRQ5 1243 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 STAMQ92783 540 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 FGD4Q96M96 766 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 APOL5Q9BWW9 433 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 SLC8A2Q9UPR5 921 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 MAGI3Q5TCQ9 1506 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 TRAV20A0A0B4J274 112 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 AP1G1O43747 822 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 KDM1AO60341 852 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 NEXNQ0ZGT2 675 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 LLGL1Q15334 1064 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 MNS1Q8NEH6 495 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 ZNF397Q8NF99 534 aaPredicted RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 ENOX1Q8TC92 643 aaKnown RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 YIPF2Q9BWQ6 316 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 SUDS3Q9H7L9 328 aaPredicted RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 CUEDC1Q9NWM3 386 aaPredicted RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 EIF4G3O43432 1585 aaKnown RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 CCDC171Q6TFL3 1326 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 RAPGEF6Q8TEU7 1601 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 FAM135AQ9P2D6 1515 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 GPATCH8Q9UKJ3 1502 aaKnown RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 EIF3CLB5ME19 914 aaKnown RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 SPARCP09486 303 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 XRCC5P13010 732 aaKnown RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 TECP42680 631 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 CPA2P48052 419 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 POLR2FP61218 127 aaKnown RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 MAP7Q14244 749 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 MPP4Q96JB8 637 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 ARPC5LQ9BPX5 153 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 ELP3Q9H9T3 547 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 IKBKGQ9Y6K9 419 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 H0YC42 278 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 ARSDP51689 593 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 NEK3P51956 506 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 TMEM266Q2M3C6 531 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 TIGD7Q6NT04 549 aaPredicted RBP6.68□□□□□ -1.34
RFC1-201ENST00000349703 KLHL24Q6TFL4 600 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 HDXQ7Z353 690 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 CERS4Q9HA82 394 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 E9PCH4 1651 aa6.68□□□□□ -1.34
RFC1-201ENST00000349703 GIPC1O14908 333 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 CPA1P15085 419 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 GJA1P17302 382 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 NFKBIAP25963 317 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 DEUP1Q05D60 604 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 LEKR1Q6ZMV7 388 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 SRLQ86TD4 932 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 KLHL7Q8IXQ5 586 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 SPC24Q8NBT2 197 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 GPKOWQ92917 476 aaPredicted RBP eCLIP6.67□□□□□ -1.342e-9■■■■□ 21
RFC1-201ENST00000349703 CHMP4CQ96CF2 233 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 PCDH10Q9P2E7 1040 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 NCOA3Q9Y6Q9 1424 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 PRDM15P57071 1507 aaPredicted RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 CEP170Q5SW79 1584 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 VIRMAQ69YN4 1812 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 TTC36A6NLP5 189 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 DIAPH1O60610 1272 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 PDE8AO60658 829 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 CAVIN2O95810 425 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 TDO2P48775 406 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 MAP1SQ66K74 1059 aaPredicted RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 PGBD2Q6P3X8 592 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 ALG2Q9H553 416 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 ATP6V0A4Q9HBG4 840 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 EGFL7Q9UHF1 273 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 COA3Q9Y2R0 106 aaPredicted RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 MAGED1Q9Y5V3 778 aaPredicted RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 LAMC1P11047 1609 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 BUB1BO60566 1050 aaPredicted RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 TUBB4AP04350 444 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 PGRP06401 933 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 EMP3P54852 163 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 UBE2HP62256 183 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 FAM98CQ17RN3 349 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 CCDC38Q502W7 563 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 DAAM2Q86T65 1068 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 RPAINQ86UA6 219 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 MCF2L2Q86YR7 1114 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 ZSCAN1Q8NBB4 408 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 SSH1Q8WYL5 1049 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms