RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SSRP1Q08945 709 aaKnown RBP16.93■□□□□ 0.3
PTBP1-201ENST00000349038 CYB5R4Q7L1T6 521 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 MAP3K14Q99558 947 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 AGPAT5Q9NUQ2 364 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 ZMYM6O95789 1325 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 KRT86O43790 486 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 MOCS3O95396 460 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 GUCY2DQ02846 1103 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 MORC3Q14149 939 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 TRADDQ15628 312 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 TTC5Q8N0Z6 440 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 DDX20Q9UHI6 824 aaKnown RBP16.92■□□□□ 0.3
PTBP1-201ENST00000349038 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 REXO2Q9Y3B8 237 aaKnown RBP16.92■□□□□ 0.3
PTBP1-201ENST00000349038 SLC12A7Q9Y666 1083 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 KIF1AQ12756 1690 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 TJP1Q07157 1748 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 MCM3P25205 808 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 MYO1EQ12965 1108 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 PPP1R7Q15435 360 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 SNCBQ16143 134 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
PTBP1-201ENST00000349038 ZNF473Q8WTR7 871 aaKnown RBP16.92■□□□□ 0.3
PTBP1-201ENST00000349038 SPDL1Q96EA4 605 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 CCT8L2Q96SF2 557 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 KIF9Q9HAQ2 790 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
PTBP1-201ENST00000349038 A0A087X0B3 334 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 C8orf74Q6P047 294 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 NOSTRINQ8IVI9 506 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 KLHL7Q8IXQ5 586 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 CCDC189A1A4V9 331 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 KCNJ18B7U540 433 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 GPAA1O43292 621 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 PLEKP08567 350 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 FAM153BP0C7A2 387 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 COPB1P53618 953 aaKnown RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 AMPD2Q01433 879 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 CKAP4Q07065 602 aaKnown RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 KCNJ12Q14500 433 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 FAM153CQ494X1 144 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 HIBCHQ6NVY1 386 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 EPB41L5Q9HCM4 733 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 ZNHIT6Q9NWK9 470 aaKnown RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 FAM153AQ9UHL3 310 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 ANGEL1Q9UNK9 670 aaKnown RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 MEGF6O75095 1541 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 KIF5AQ12840 1032 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 ACCSLQ4AC99 568 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 MICALCLQ6ZW33 695 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 SYMPKQ92797 1274 aaKnown RBP16.91■□□□□ 0.3
PTBP1-201ENST00000349038 ZBTB10Q96DT7 871 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 ORAI2Q96SN7 254 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 L3MBTL1Q9Y468 752 aa16.91■□□□□ 0.3
PTBP1-201ENST00000349038 RANBP6O60518 1105 aaKnown RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 BUB1BO60566 1050 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 ZAP70P43403 619 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 AARSP49588 968 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■■■■□ 23.3
PTBP1-201ENST00000349038 CARSP49589 748 aaKnown RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 SCARF1Q14162 830 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 PACSIN2Q9UNF0 486 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 A0A1B0GUA9 196 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 ARID5AQ03989 594 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 APOA5Q6Q788 366 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 ZBTB3Q9H5J0 574 aa16.9■□□□□ 0.3
PTBP1-201ENST00000349038 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.9■□□□□ 0.3
PTBP1-201ENST00000349038 NR1D1P20393 614 aa16.89■□□□□ 0.3
PTBP1-201ENST00000349038 TOB1P50616 345 aaPredicted RBP16.89■□□□□ 0.3
PTBP1-201ENST00000349038 ELOA2Q8IYF1 753 aaPredicted RBP16.89■□□□□ 0.3
PTBP1-201ENST00000349038 OR8K1Q8NGG5 319 aa16.89■□□□□ 0.3
PTBP1-201ENST00000349038 NELFBQ8WX92 580 aa16.89■□□□□ 0.3
PTBP1-201ENST00000349038 CTAGE1Q96RT6 745 aa16.89■□□□□ 0.3
PTBP1-201ENST00000349038 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.3
PTBP1-201ENST00000349038 B4DLN1 442 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 APPBP2Q92624 585 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 VIPAS39Q9H9C1 493 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 EME2A4GXA9 379 aaPredicted RBP16.89■□□□□ 0.29
PTBP1-201ENST00000349038 NBPF26B4DH59 902 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 CDKL5O76039 1030 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 MDM2Q00987 491 aaPredicted RBP16.89■□□□□ 0.29
PTBP1-201ENST00000349038 NBPF10Q6P3W6 841 aaKnown RBP16.89■□□□□ 0.29
PTBP1-201ENST00000349038 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms