RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 NME8Q8N427 588 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 DCTPP1Q9H773 170 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 MOSPD1Q9UJG1 213 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.33
TRAF3-201ENST00000347662 ANGPTL8Q6UXH0 198 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 MAGED2Q9UNF1 606 aaPredicted RBP12.96□□□□□ -0.33
TRAF3-201ENST00000347662 SYTL2Q9HCH5 934 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 MAST3O60307 1309 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 NUDCD3Q8IVD9 361 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 GYG1P46976 350 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 CAPN12Q6ZSI9 719 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 CCDC138Q96M89 665 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
TRAF3-201ENST00000347662 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.34
TRAF3-201ENST00000347662 MRPS27Q92552 414 aaKnown RBP12.96□□□□□ -0.34
TRAF3-201ENST00000347662 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
TRAF3-201ENST00000347662 DENND2CQ68D51 928 aa12.96□□□□□ -0.34
TRAF3-201ENST00000347662 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.34
TRAF3-201ENST00000347662 CCDC186Q7Z3E2 898 aa12.96□□□□□ -0.34
TRAF3-201ENST00000347662 PLEKHA4Q9H4M7 779 aa12.96□□□□□ -0.34
TRAF3-201ENST00000347662 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
TRAF3-201ENST00000347662 HEXIM1O94992 359 aaKnown RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 Q9H521 79 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 TNNI1P19237 187 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 CTSWP56202 376 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 EIF4A1P60842 406 aaKnown RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 CCDC124Q96CT7 223 aaKnown RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 CTTNBP2NLQ9P2B4 639 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 PZPP20742 1482 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 DTNBO60941 627 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 ZAP70P43403 619 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 KLHL7Q8IXQ5 586 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 SULF1Q8IWU6 871 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 PIK3C2GO75747 1445 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 GCNT3O95395 438 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 INPP5BP32019 993 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 ARHGDIAP52565 204 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 STK24Q9Y6E0 443 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 UGGT1Q9NYU2 1555 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 IGSF3O75054 1194 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 MYCP01106 439 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 TROVE2P10155 538 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAF3-201ENST00000347662 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 PSMB7Q99436 277 aa12.95□□□□□ -0.34
TRAF3-201ENST00000347662 CHL1O00533 1208 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 VWA3BQ502W6 1294 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 MTRQ99707 1265 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ZSCAN22P10073 491 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 HLA-DPA1P20036 260 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ZC3H12BQ5HYM0 836 aaKnown RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 MYCT1Q8N699 235 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 PRIMPOLQ96LW4 560 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 METP08581 1390 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 FIS1Q9Y3D6 152 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 RASSF2P50749 326 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 AK2P54819 239 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ZNF174Q15697 407 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 FAM227BQ96M60 508 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 CCDC13Q8IYE1 715 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 GIMAP4Q9NUV9 329 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 CFBP00751 764 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 PRPSAP1Q14558 356 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■■■□ 20.4
TRAF3-201ENST00000347662 IFT20Q8IY31 132 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 TAB3Q8N5C8 712 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 PPWD1Q96BP3 646 aaKnown RBP12.94□□□□□ -0.34
TRAF3-201ENST00000347662 VPS16Q9H269 839 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
TRAF3-201ENST00000347662 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 LZICQ8WZA0 190 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 CFAP74Q9C0B2 1584 aa12.93□□□□□ -0.34
TRAF3-201ENST00000347662 EEF1B2P24534 225 aaKnown RBP12.93□□□□□ -0.34
TRAF3-201ENST00000347662 PDE4DQ08499 809 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms