RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 ZC3H15Q8WU90 426 aaKnown RBP12.63□□□□□ -0.39
ECM1-201ENST00000346569 GPKOWQ92917 476 aaPredicted RBP eCLIP12.63□□□□□ -0.39
ECM1-201ENST00000346569 ZNF341Q9BYN7 854 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 ZMYND12Q9H0C1 365 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
ECM1-201ENST00000346569 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.63□□□□□ -0.39
ECM1-201ENST00000346569 KIF3CO14782 793 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 PLA2G6O60733 806 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 SLC16A2P36021 539 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 CCDC96Q2M329 555 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 SUPT20HL1Q3ZLR7 823 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 BLIDQ8IZY5 108 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 PCDHA4Q9UN74 947 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 USP17L10C9JJH3 530 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 ZBTB5O15062 677 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 EPHX2P34913 555 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 RILPL1Q5EBL4 403 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 CCDC84Q86UT8 332 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 CCDC148Q8NFR7 591 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 ZNF526Q8TF50 670 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 DCPSQ96C86 337 aaKnown RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 TMEM63CQ9P1W3 806 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 SEC63Q9UGP8 760 aaKnown RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 PCDHA7Q9UN72 937 aa12.62□□□□□ -0.39
ECM1-201ENST00000346569 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
ECM1-201ENST00000346569 PCNTO95613 3336 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
ECM1-201ENST00000346569 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 SPTLC2O15270 562 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
ECM1-201ENST00000346569 ADALQ6DHV7 355 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 KCNG4Q8TDN1 519 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 CCDC12Q8WUD4 166 aaPredicted RBP12.61□□□□□ -0.39
ECM1-201ENST00000346569 COA7Q96BR5 231 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 KIAA1683Q9H0B3 1180 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
ECM1-201ENST00000346569 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 PPP6R2O75170 966 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 PTPRAP18433 802 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 GNA11P29992 359 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 NAPAP54920 295 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 STK38Q15208 465 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
ECM1-201ENST00000346569 AXDND1Q5T1B0 1012 aaPredicted RBP12.6□□□□□ -0.39
ECM1-201ENST00000346569 SYDE2Q5VT97 1194 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
ECM1-201ENST00000346569 DLK2Q6UY11 383 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 ZKSCAN4Q969J2 545 aaPredicted RBP12.6□□□□□ -0.39
ECM1-201ENST00000346569 GZF1Q9H116 711 aaPredicted RBP12.6□□□□□ -0.39
ECM1-201ENST00000346569 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
ECM1-201ENST00000346569 PCDHA6Q9UN73 950 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 PCDHB6Q9Y5E3 794 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 PCDHA8Q9Y5H6 950 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 SSC5DA1L4H1 1573 aa12.6□□□□□ -0.39
ECM1-201ENST00000346569 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 RAD21O60216 631 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 LIG1P18858 919 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 TRAPPC10P48553 1259 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 GSE1Q14687 1217 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 SULF1Q8IWU6 871 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
ECM1-201ENST00000346569 CHURC1Q8WUH1 139 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 WRNIP1Q96S55 665 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 PRR12Q9ULL5 1215 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 FZD1Q9UP38 647 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
ECM1-201ENST00000346569 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 WNT7AO00755 349 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 FAM83BQ5T0W9 1011 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 KRT26Q7Z3Y9 468 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 ENGASEQ8NFI3 743 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 LPAR1Q92633 364 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 RIC8AQ9NPQ8 531 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms