RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MAIP1Q8WWC4 291 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 HVCN1Q96D96 273 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ZMAT2Q96NC0 199 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 MCM9Q9NXL9 1143 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 LRWD1Q9UFC0 647 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ADCY9O60503 1353 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ABCC2Q92887 1545 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 SPECC1L-ADORA2AF8WAN1 911 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 SEPT2Q15019 361 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 HELBQ8NG08 1087 aaPredicted RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 CENPKQ9BS16 269 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 MAN1B1Q9UKM7 699 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 MOCS3O95396 460 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 MUM1L1Q5H9M0 696 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ELAC2Q9BQ52 826 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 RPN1P04843 607 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 POLR2FP61218 127 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 RESTQ13127 1097 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 DYNC1I2Q13409 638 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 CCDC152Q4G0S7 254 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 CAPN12Q6ZSI9 719 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 SNX29Q8TEQ0 813 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 EEF2KMTQ96G04 330 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 RUNDC3BQ96NL0 473 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 XAB2Q9HCS7 855 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 USTQ9Y2C2 406 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 PPP6R2O75170 966 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ATP5JP18859 108 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 SMYD4Q8IYR2 804 aaPredicted RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ENOX1Q8TC92 643 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 LIN9Q5TKA1 542 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 EYA2O00167 538 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 TUBGCP2Q9BSJ2 902 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 PLAAQ9Y263 795 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 SPDYE3A6NKU9 549 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 SLCO1A2P46721 670 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 GSTO1P78417 241 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 TACC3Q9Y6A5 838 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 ZC3H18Q86VM9 953 aaKnown RBP13.28□□□□□ -0.28
COL12A1-202ENST00000345356 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
COL12A1-202ENST00000345356 GSDMAQ96QA5 445 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.28□□□□□ -0.28
COL12A1-202ENST00000345356 RNF8O76064 485 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 PLTPP55058 493 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 NLRP14Q86W24 1093 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 RNF14Q9UBS8 474 aa13.28□□□□□ -0.28
COL12A1-202ENST00000345356 CARMIL3Q8ND23 1372 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 ENO4A6NNW6 628 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 DNAJC8O75937 253 aaPredicted RBP13.27□□□□□ -0.28
COL12A1-202ENST00000345356 STAT1P42224 750 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 RNASELQ05823 741 aaKnown RBP13.27□□□□□ -0.28
COL12A1-202ENST00000345356 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.28
COL12A1-202ENST00000345356 DPH6Q7L8W6 267 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 ST13P4Q8IZP2 240 aaPredicted RBP13.27□□□□□ -0.28
COL12A1-202ENST00000345356 LRRC43Q8N309 656 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 EYA1Q99502 592 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 USP44Q9H0E7 712 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 ZMYM6O95789 1325 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 TTC36A6NLP5 189 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 H0Y3Z8 333 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.28
COL12A1-202ENST00000345356 H2AFZP0C0S5 128 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 ARHGAP44Q17R89 818 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 H2AFVQ71UI9 128 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 GRAMD1CQ8IYS0 662 aa13.27□□□□□ -0.28
COL12A1-202ENST00000345356 THOC1Q96FV9 657 aaKnown RBP13.27□□□□□ -0.28
COL12A1-202ENST00000345356 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 HLA-DOAP06340 250 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 RCN2Q14257 317 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 ZNF449Q6P9G9 518 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.29
COL12A1-202ENST00000345356 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.29
COL12A1-202ENST00000345356 GNA14O95837 355 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 MX2P20592 715 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 CTAGE3PQ8IX95 158 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 PASKQ96RG2 1323 aa13.27□□□□□ -0.29
COL12A1-202ENST00000345356 MFAP3LO75121 409 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 FTCDO95954 541 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 GEN1Q17RS7 908 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 ARHGEF18Q6ZSZ5 1173 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 CNOT6LQ96LI5 555 aaKnown RBP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 GMNCA6NCL1 334 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms