RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 HHIPL1Q96JK4 782 aa9.4□□□□□ -0.91
HMGCR-202ENST00000343975 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.91
HMGCR-202ENST00000343975 TAF6LQ9Y6J9 622 aa9.4□□□□□ -0.91
HMGCR-202ENST00000343975 CCDC194A0A1B0GVG4 234 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 PHF20L1A8MW92 1017 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 SLC16A2P36021 539 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 ZNF76P36508 570 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 NUCB2P80303 420 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 KCTD2Q14681 263 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-202ENST00000343975 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
HMGCR-202ENST00000343975 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-202ENST00000343975 DOCK2Q92608 1830 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 ADD1P35611 737 aaKnown RBP9.39□□□□□ -0.91
HMGCR-202ENST00000343975 MCTP2Q6DN12 878 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
HMGCR-202ENST00000343975 SMIM22K7EJ46 135 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 HSPA6P17066 643 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 IFNAR1P17181 557 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 SEC23AQ15436 765 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 USH1GQ495M9 461 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 TMTC3Q6ZXV5 915 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 ANKRD35Q8N283 1001 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 IL17RBQ9NRM6 502 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 AFG3L2Q9Y4W6 797 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 GOLGA6L4A6NEF3 574 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 PDHXO00330 501 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 HOXD10P28358 340 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 KIF23Q02241 960 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-202ENST00000343975 MAP2K1Q02750 393 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-202ENST00000343975 EVX2Q03828 476 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 CDC37Q16543 378 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-202ENST00000343975 TEX13BQ9BXU2 312 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 HOMER2Q9NSB8 354 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 PCDHA1Q9Y5I3 950 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 MYH1P12882 1939 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 SMARCA1P28370 1054 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 MAP2K2P36507 400 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 STAT3P40763 770 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 MYPNQ86TC9 1320 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 COA7Q96BR5 231 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
HMGCR-202ENST00000343975 IPO9Q96P70 1041 aaKnown RBP9.38□□□□□ -0.91
HMGCR-202ENST00000343975 SPZ1Q9BXG8 430 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 PSME4Q14997 1843 aa9.38□□□□□ -0.91
HMGCR-202ENST00000343975 PNMA6FA0A0J9YX94 578 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 SLC10A3P09131 477 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 SCG2P13521 617 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 SF3A1Q15459 793 aaKnown RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 ME3Q16798 604 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 RASAL3Q86YV0 1011 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 C12orf42Q96LP6 360 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 ZBTB5O15062 677 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 FMNL1O95466 1100 aaPredicted RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 SLC25A27O95847 323 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 GJB2P29033 226 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 TROAPQ12815 778 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 CSPP1Q1MSJ5 1256 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 TKFCQ3LXA3 575 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 CST9Q5W186 159 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 GPRC5AQ8NFJ5 357 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 PHKBQ93100 1093 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 PPP1R9AQ9ULJ8 1098 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 BAZ2AQ9UIF9 1905 aaKnown RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 WDR33Q9C0J8 1336 aaKnown RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 A0A0G2JLL6 359 aaPredicted RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 ADCY7P51828 1080 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 HERVK_113P62684 666 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 SNRNP48Q6IEG0 339 aaKnown RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 PRRT2Q7Z6L0 340 aaPredicted RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 CNKSR2Q8WXI2 1034 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
HMGCR-202ENST00000343975 BRPF3Q9ULD4 1205 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
HMGCR-202ENST00000343975 ABCB11O95342 1321 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 IGKV6D-41A0A0C4DH26 115 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 CA12O43570 354 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
HMGCR-202ENST00000343975 CFBP00751 764 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 SH3D19Q5HYK7 790 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 PIGSQ96S52 555 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
HMGCR-202ENST00000343975 ZCCHC17Q9NP64 241 aaKnown RBP9.36□□□□□ -0.91
HMGCR-202ENST00000343975 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
HMGCR-202ENST00000343975 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 GALNT17Q6IS24 598 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 DPP9Q86TI2 863 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 ATG4CQ96DT6 458 aa9.36□□□□□ -0.91
HMGCR-202ENST00000343975 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms