RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
COL11A2-201ENST00000341947 MIPOL1Q8TD10 442 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 TMOD1P28289 359 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 KRT26Q7Z3Y9 468 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 NBPF3Q9H094 633 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 DMP1Q13316 513 aaPredicted RBP16.75■□□□□ 0.27
COL11A2-201ENST00000341947 PPP4R1Q8TF05 950 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 NRBP2Q9NSY0 501 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
COL11A2-201ENST00000341947 SEC24BO95487 1268 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 ICA1Q05084 483 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 IFRD2Q12894 506 aaPredicted RBP16.75■□□□□ 0.27
COL11A2-201ENST00000341947 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 LRRC47Q8N1G4 583 aaKnown RBP16.75■□□□□ 0.27
COL11A2-201ENST00000341947 BCAP29Q9UHQ4 241 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 PCDHA12Q9UN75 941 aa16.75■□□□□ 0.27
COL11A2-201ENST00000341947 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 BTDP43251 543 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 KCNJ12Q14500 433 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 TSNAXIP1Q2TAA8 658 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 ANKRD20A3Q5VUR7 823 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 RSPH3Q86UC2 560 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 SCNN1DP51172 638 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 IFNL3Q8IZI9 196 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 SEPT10Q9P0V9 454 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 C10orf67Q8IYJ2 551 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 KIF3CO14782 793 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 ABCB4P21439 1286 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 SLAIN2Q9P270 581 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 BUB1BO60566 1050 aaPredicted RBP16.74■□□□□ 0.27
COL11A2-201ENST00000341947 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 SUGCTQ9HAC7 445 aa16.74■□□□□ 0.27
COL11A2-201ENST00000341947 POLGP54098 1239 aaPredicted RBP16.73■□□□□ 0.27
COL11A2-201ENST00000341947 MORC3Q14149 939 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 GYG1P46976 350 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 PLA2G4DQ86XP0 818 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 PHLDB2Q86SQ0 1253 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 ZMYM6O95789 1325 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 DDAH1O94760 285 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 TROVE2P10155 538 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL11A2-201ENST00000341947 ZNF274Q96GC6 653 aaPredicted RBP16.73■□□□□ 0.27
COL11A2-201ENST00000341947 INPP5BP32019 993 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 NOSTRINQ8IVI9 506 aa16.73■□□□□ 0.27
COL11A2-201ENST00000341947 IFNB1P01574 187 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 PPFIA1Q13136 1202 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 PNMA1Q8ND90 353 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 TFDP1Q14186 410 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 KRT71Q3SY84 523 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
COL11A2-201ENST00000341947 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 NCAPGQ9BPX3 1015 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 ARMCX3Q9UH62 379 aaPredicted RBP16.72■□□□□ 0.27
COL11A2-201ENST00000341947 CCPG1Q9ULG6 757 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 GOLGA8CPA6NN73 597 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 SH2D4BQ5SQS7 431 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
COL11A2-201ENST00000341947 ESYT2A0FGR8 921 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 ADCY8P40145 1251 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
COL11A2-201ENST00000341947 FAM170AA1A519 330 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 STX2P32856 288 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 ZBTB38Q8NAP3 1195 aaPredicted RBP16.71■□□□□ 0.27
COL11A2-201ENST00000341947 CSRNP1Q96S65 589 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 ARHGEF12Q9NZN5 1544 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 KLRF2D3W0D1 207 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 RNF40O75150 1001 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 POLA2Q14181 598 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 MGARPQ8TDB4 240 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 TM6SF1Q9BZW5 370 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 TLR3O15455 904 aaKnown RBP16.71■□□□□ 0.27
COL11A2-201ENST00000341947 RGS16O15492 202 aaPredicted RBP16.71■□□□□ 0.27
COL11A2-201ENST00000341947 IGBP1P78318 339 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
COL11A2-201ENST00000341947 TRIM56Q9BRZ2 755 aaKnown RBP16.71■□□□□ 0.27
COL11A2-201ENST00000341947 CCDC68Q9H2F9 335 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 DLATP10515 647 aaKnown RBP16.71■□□□□ 0.27
COL11A2-201ENST00000341947 PFKFB1P16118 471 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 PIK3CAP42336 1068 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 CCDC170Q8IYT3 715 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 SDR42E1Q8WUS8 393 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 SCYL1Q96KG9 808 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 RPGRIP1Q96KN7 1286 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 PPP1R12CQ9BZL4 782 aa16.71■□□□□ 0.27
COL11A2-201ENST00000341947 SCG2P13521 617 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms