RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 USP17L3A6NCW0 530 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 USP17L4A6NCW7 530 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 NAP1L1P55209 391 aaKnown RBP16.17■□□□□ 0.18
CPSF7-201ENST00000340437 MECOMQ03112 1051 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 FUT2Q10981 343 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 USP17L1Q7RTZ2 530 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
CPSF7-201ENST00000340437 FAM205AQ6ZU69 1335 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 ATP8B1O43520 1251 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 LETM2Q2VYF4 491 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 OR8K1Q8NGG5 319 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 SMCR8Q8TEV9 937 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-201ENST00000340437 TMEM60Q9H2L4 133 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 TMEM51Q9NW97 253 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 RWDD2AQ9UIY3 292 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 BMP15O95972 392 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 TBC1D8BQ0IIM8 1120 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 BLIDQ8IZY5 108 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 CSGALNACT2Q8N6G5 542 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 MMS19Q96T76 1030 aa16.17■□□□□ 0.18
CPSF7-201ENST00000340437 PBX1P40424 430 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 ZNF658Q5TYW1 1059 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 CRNKL1Q9BZJ0 848 aaKnown RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 ZNHIT6Q9NWK9 470 aaKnown RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 CNTNAP5Q8WYK1 1306 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 ARHGAP25P42331 645 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 ASIC1P78348 528 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 SPAG1Q07617 926 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 DZIP1Q86YF9 867 aaKnown RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 FAM84BQ96KN1 310 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 SPEF2Q9C093 1822 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 LRRIQ3A6PVS8 624 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 CALM1P0DP23 149 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 CALM2P0DP24 149 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 CALM3P0DP25 149 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 STIM1Q13586 685 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 NPY5RQ15761 445 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 DNAJC21Q5F1R6 531 aaKnown RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 SLC51AQ86UW1 340 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 ELOA2Q8IYF1 753 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-201ENST00000340437 COL18A1P39060 1754 aa16.16■□□□□ 0.18
CPSF7-201ENST00000340437 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 ZPR1O75312 459 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 PDE4DQ08499 809 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
CPSF7-201ENST00000340437 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 ZNF384Q8TF68 577 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 JAKMIP2Q96AA8 810 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 GLI3P10071 1580 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 TNS2Q63HR2 1409 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 CXCR5P32302 372 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 SIK1P57059 783 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 ITPK1Q13572 414 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 CCDC96Q2M329 555 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-201ENST00000340437 DCP1AQ9NPI6 582 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-201ENST00000340437 LIMA1Q9UHB6 759 aaKnown RBP16.15■□□□□ 0.18
CPSF7-201ENST00000340437 L1RE1Q9UN81 338 aa16.15■□□□□ 0.18
CPSF7-201ENST00000340437 FAM170AA1A519 330 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 PSMA7O14818 248 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 E2F4Q16254 413 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 CWC15Q9P013 229 aaKnown RBP16.14■□□□□ 0.17
CPSF7-201ENST00000340437 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 IDEP14735 1019 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 DEF6Q9H4E7 631 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 FAM204AQ9H8W3 233 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 FAM207AQ9NSI2 230 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-201ENST00000340437 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 REXO2Q9Y3B8 237 aaKnown RBP16.14■□□□□ 0.17
CPSF7-201ENST00000340437 SAR1BQ9Y6B6 198 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 KCNQ2O43526 872 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 C2orf54Q08AI8 447 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 DYMQ7RTS9 669 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 LACRTQ9GZZ8 138 aa16.14■□□□□ 0.17
CPSF7-201ENST00000340437 CCNT1O60563 726 aaKnown RBP16.13■□□□□ 0.17
CPSF7-201ENST00000340437 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 FCER1AP12319 257 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 WHAMMP3Q1A5X7 153 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 TUBGCP2Q9BSJ2 902 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 SLC39A2Q9NP94 309 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 NTSR2O95665 410 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 KIF5BP33176 963 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 TECP42680 631 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 DIXDC1Q155Q3 683 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms