RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 EIF2AK2P19525 551 aaKnown RBP14.36□□□□□ -0.11
LIN54-201ENST00000340417 INF2Q27J81 1249 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 SMC1BQ8NDV3 1235 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 KDM3AQ9Y4C1 1321 aa14.36□□□□□ -0.11
LIN54-201ENST00000340417 RPAP1Q9BWH6 1393 aaPredicted RBP14.36□□□□□ -0.11
LIN54-201ENST00000340417 PPLO60437 1756 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 PRPF6O94906 941 aaKnown RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 MTMR2Q13614 643 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 RPAP3Q9H6T3 665 aaPredicted RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 POLRMTO00411 1230 aaKnown RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 RNASELQ05823 741 aaKnown RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 TRERF1Q96PN7 1200 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 DAGLAQ9Y4D2 1042 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 TRAF5O00463 557 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 GCNT3O95395 438 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 LRCH2Q5VUJ6 765 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
LIN54-201ENST00000340417 APOL6Q9BWW8 343 aa14.35□□□□□ -0.11
LIN54-201ENST00000340417 HSPA4P34932 840 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 MAP1SQ66K74 1059 aaPredicted RBP14.34□□□□□ -0.11
LIN54-201ENST00000340417 ANO1Q5XXA6 986 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 LRRC45Q96CN5 670 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 ANO3Q9BYT9 981 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 KIF13AQ9H1H9 1805 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 LRRIQ4A6NIV6 560 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 KRT5P13647 590 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 SPAG1Q07617 926 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 CNNM4Q6P4Q7 775 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 DYMQ7RTS9 669 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 ZNF274Q96GC6 653 aaPredicted RBP14.34□□□□□ -0.11
LIN54-201ENST00000340417 GNAT1P11488 350 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
LIN54-201ENST00000340417 RGS22Q8NE09 1264 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 RNF34Q969K3 372 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 UBR1Q8IWV7 1749 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 DNA2P51530 1060 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 GTF2A2P52657 109 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 SESTD1Q86VW0 696 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
LIN54-201ENST00000340417 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.11
LIN54-201ENST00000340417 STXBP2Q15833 593 aa14.33□□□□□ -0.11
LIN54-201ENST00000340417 HHIPL2Q6UWX4 724 aa14.33□□□□□ -0.11
LIN54-201ENST00000340417 RNF146Q9NTX7 359 aa14.33□□□□□ -0.11
LIN54-201ENST00000340417 SERPINA10Q9UK55 444 aa14.33□□□□□ -0.11
LIN54-201ENST00000340417 ENTPD3O75355 529 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 TRMT2AQ8IZ69 625 aaKnown RBP14.33□□□□□ -0.12
LIN54-201ENST00000340417 TBC1D7Q9P0N9 293 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 LIG4P49917 911 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 ATL3Q6DD88 541 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 MICAL1Q8TDZ2 1067 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 FAM151AQ8WW52 585 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 PHLPP1O60346 1717 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 USP32Q8NFA0 1604 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 TTC14Q96N46 770 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 C19orf81C9J6K1 198 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 H0YCG3 227 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 STAT3P40763 770 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 SEPT7Q16181 437 aaKnown RBP14.33□□□□□ -0.12
LIN54-201ENST00000340417 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
LIN54-201ENST00000340417 ACBD3Q9H3P7 528 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 ADGRB1O14514 1584 aa14.33□□□□□ -0.12
LIN54-201ENST00000340417 TECP42680 631 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 SKIV2LQ15477 1246 aaKnown RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 EXOC8Q8IYI6 725 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 NLRP7Q8WX94 980 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 SLC7A3Q8WY07 619 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 FCGRTP55899 365 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 HSP90AA4PQ58FG1 418 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 MKRN1Q9UHC7 482 aaKnown RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 ARGLU1Q9NWB6 273 aaPredicted RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 TMCO5BA8MYB1 307 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 hCG_1984214I3L0E3 225 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 ODR4Q5SWX8 454 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 ZNF713Q8N859 430 aaPredicted RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 IWS1Q96ST2 819 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 TMEM39BQ9GZU3 492 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 KIAA1841Q6NSI8 718 aa14.32□□□□□ -0.12
LIN54-201ENST00000340417 GTF3C2Q8WUA4 911 aaPredicted RBP14.32□□□□□ -0.12
LIN54-201ENST00000340417 STX10O60499 249 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 CYP2B6P20813 491 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
LIN54-201ENST00000340417 IQCEQ6IPM2 695 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 SLC44A5Q8NCS7 719 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 TM6SF1Q9BZW5 370 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 OSBPL5Q9H0X9 879 aaPredicted RBP14.31□□□□□ -0.12
LIN54-201ENST00000340417 MARK3P27448 753 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 PPP1R2P41236 205 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms