RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 A0A1W2PQ64 194 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 A0A1W2PQD8 194 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 PPP6R2O75170 966 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 SLC1A4P43007 532 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 DAGLBQ8NCG7 672 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 CCDC148Q8NFR7 591 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.34■■□□□ 1.49
VRK2-201ENST00000340157 RNF181Q9P0P0 153 aa24.34■■□□□ 1.49
VRK2-201ENST00000340157 SEC63Q9UGP8 760 aaKnown RBP24.34■■□□□ 1.49
VRK2-201ENST00000340157 RAD21O60216 631 aa24.33■■□□□ 1.49
VRK2-201ENST00000340157 PPP1R11O60927 126 aaPredicted RBP24.33■■□□□ 1.49
VRK2-201ENST00000340157 HIRAP54198 1017 aaPredicted RBP24.33■■□□□ 1.49
VRK2-201ENST00000340157 SNW1Q13573 536 aaKnown RBP24.33■■□□□ 1.49
VRK2-201ENST00000340157 LRSAM1Q6UWE0 723 aa24.33■■□□□ 1.49
VRK2-201ENST00000340157 FAM177A1Q8N128 213 aaPredicted RBP24.33■■□□□ 1.49
VRK2-201ENST00000340157 ENGASEQ8NFI3 743 aa24.33■■□□□ 1.49
VRK2-201ENST00000340157 RASGRP4Q8TDF6 673 aa24.33■■□□□ 1.49
VRK2-201ENST00000340157 NUP88Q99567 741 aaPredicted RBP24.33■■□□□ 1.49
VRK2-201ENST00000340157 ZMYND12Q9H0C1 365 aa24.33■■□□□ 1.49
VRK2-201ENST00000340157 USP17L10C9JJH3 530 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 DDNO94850 711 aaPredicted RBP24.32■■□□□ 1.48
VRK2-201ENST00000340157 KIAA1755Q5JYT7 1200 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 GMCL1Q96IK5 515 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 ATP2B1P20020 1258 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 ANGEL2Q5VTE6 544 aaKnown RBP24.32■■□□□ 1.48
VRK2-201ENST00000340157 PIK3AP1Q6ZUJ8 805 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 FSIP1Q8NA03 581 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 ISY1Q9ULR0 285 aaKnown RBP24.32■■□□□ 1.48
VRK2-201ENST00000340157 SYNPO2Q9UMS6 1093 aa24.32■■□□□ 1.48
VRK2-201ENST00000340157 NAPAP54920 295 aa24.31■■□□□ 1.48
VRK2-201ENST00000340157 DDX19AQ9NUU7 478 aaKnown RBP24.31■■□□□ 1.48
VRK2-201ENST00000340157 PCDHA6Q9UN73 950 aa24.31■■□□□ 1.48
VRK2-201ENST00000340157 TMX2Q9Y320 296 aa24.31■■□□□ 1.48
VRK2-201ENST00000340157 PCDHA8Q9Y5H6 950 aa24.31■■□□□ 1.48
VRK2-201ENST00000340157 NBPF12Q5TAG4 269 aaPredicted RBP24.3■■□□□ 1.48
VRK2-201ENST00000340157 GALNT17Q6IS24 598 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 MRPS27Q92552 414 aaKnown RBP24.3■■□□□ 1.48
VRK2-201ENST00000340157 CCDC84Q86UT8 332 aaPredicted RBP24.3■■□□□ 1.48
VRK2-201ENST00000340157 COA7Q96BR5 231 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 CLIC6Q96NY7 704 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 GLIS2Q9BZE0 524 aaPredicted RBP24.3■■□□□ 1.48
VRK2-201ENST00000340157 NUP62CLQ9H1M0 184 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 CLSTN2Q9H4D0 955 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 ARHGEF10LQ9HCE6 1279 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 MRVI1Q9Y6F6 885 aa24.3■■□□□ 1.48
VRK2-201ENST00000340157 PNMA6FA0A0J9YX94 578 aa24.29■■□□□ 1.48
VRK2-201ENST00000340157 A0A1B0GVL5 298 aa24.29■■□□□ 1.48
VRK2-201ENST00000340157 TRIM75PA6NK02 468 aa24.29■■□□□ 1.48
VRK2-201ENST00000340157 CAMK4Q16566 473 aa24.29■■□□□ 1.48
VRK2-201ENST00000340157 C9orf131Q5VYM1 1079 aa24.29■■□□□ 1.48
VRK2-201ENST00000340157 DOCK1Q14185 1865 aa24.29■■□□□ 1.48
VRK2-201ENST00000340157 ESYT2A0FGR8 921 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 SMCO2A6NFE2 343 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 hCG_1984214I3L0E3 225 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 NDUFA8P51970 172 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 GRIN1Q05586 938 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 FAM160A1Q05DH4 1040 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 SHC4Q6S5L8 630 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 FMR1NBQ8N0W7 255 aaPredicted RBP24.28■■□□□ 1.48
VRK2-201ENST00000340157 SPICE1Q8N0Z3 855 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 ZNF713Q8N859 430 aaPredicted RBP24.28■■□□□ 1.48
VRK2-201ENST00000340157 GGA3Q9NZ52 723 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 FBXO2Q9UK22 296 aaPredicted RBP24.28■■□□□ 1.48
VRK2-201ENST00000340157 ZBTB5O15062 677 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 CMA1P23946 247 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 CCDC73Q6ZRK6 1079 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 APOBEC3FQ8IUX4 373 aaKnown RBP24.28■■□□□ 1.48
VRK2-201ENST00000340157 JMYQ8N9B5 988 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 CCDC12Q8WUD4 166 aaPredicted RBP24.28■■□□□ 1.48
VRK2-201ENST00000340157 FUCA2Q9BTY2 467 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 GRPEL1Q9HAV7 217 aa24.28■■□□□ 1.48
VRK2-201ENST00000340157 NOL7Q9UMY1 257 aaKnown RBP24.28■■□□□ 1.48
VRK2-201ENST00000340157 ASNSP08243 561 aa24.27■■□□□ 1.48
VRK2-201ENST00000340157 TTC38Q5R3I4 469 aa24.27■■□□□ 1.48
VRK2-201ENST00000340157 PRAMEF18Q5VWM3 479 aa24.27■■□□□ 1.48
VRK2-201ENST00000340157 RBM43Q6ZSC3 357 aaKnown RBP24.27■■□□□ 1.48
VRK2-201ENST00000340157 MORC2Q9Y6X9 1032 aaPredicted RBP24.27■■□□□ 1.48
VRK2-201ENST00000340157 LETM1O95202 739 aaPredicted RBP24.26■■□□□ 1.47
VRK2-201ENST00000340157 BMP3P12645 472 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 PTPREP23469 700 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 TRAPPC10P48553 1259 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 KRI1Q8N9T8 703 aaKnown RBP24.26■■□□□ 1.47
VRK2-201ENST00000340157 RBSNQ9H1K0 784 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 SSC5DA1L4H1 1573 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 CUTAO60888 179 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 XRCC6P12956 609 aaKnown RBP eCLIP24.26■■□□□ 1.47
VRK2-201ENST00000340157 ZNF174Q15697 407 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 QRICH1Q2TAL8 776 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 BTNL9Q6UXG8 535 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 C6orf50Q9HD87 102 aa24.26■■□□□ 1.47
VRK2-201ENST00000340157 SMCHD1A6NHR9 2005 aa24.25■■□□□ 1.47
VRK2-201ENST00000340157 TMEM232C9JQI7 657 aa24.25■■□□□ 1.47
VRK2-201ENST00000340157 PFKFB1P16118 471 aa24.25■■□□□ 1.47
VRK2-201ENST00000340157 TNMDQ9H2S6 317 aa24.25■■□□□ 1.47
VRK2-201ENST00000340157 CEP131Q9UPN4 1083 aa24.25■■□□□ 1.47
VRK2-201ENST00000340157 FAM237AA0A1B0GTK4 181 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 GNA11P29992 359 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 MRE11P49959 708 aa24.24■■□□□ 1.47
VRK2-201ENST00000340157 CDC37Q16543 378 aaPredicted RBP24.24■■□□□ 1.47
VRK2-201ENST00000340157 RESP18Q5W5W9 173 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms