RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SUN2Q9UH99 717 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 PHF24Q9UPV7 400 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 USH1CQ9Y6N9 552 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 NSD2O96028 1365 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 TARSL2A2RTX5 802 aaKnown RBP10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 CHGBP05060 677 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 EPB41P11171 864 aaKnown RBP10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 ETS2P15036 469 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 TUBB4BP68371 445 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 KBTBD12Q3ZCT8 623 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 NBPF14Q5TI25 921 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 CPLX4Q7Z7G2 160 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 C17orf50Q8WW18 174 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 PPP1R12CQ9BZL4 782 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 ZWILCHQ9H900 591 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 REXO2Q9Y3B8 237 aaKnown RBP10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 ASB3Q9Y575 518 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 A0A0D9SFI3 127 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 SPTLC2O15270 562 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 MFAP3LO75121 409 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 ITGB3BPQ13352 177 aaPredicted RBP10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 TUBB2AQ13885 445 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 TRADDQ15628 312 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 CCDC57Q2TAC2 916 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 MCM10Q7L590 875 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 NSUN7Q8NE18 718 aaKnown RBP10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 MED15Q96RN5 788 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 CENPOQ9BU64 300 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 TUBB2BQ9BVA1 445 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 NFU1Q9UMS0 254 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 TTF2Q9UNY4 1162 aaKnown RBP10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 PCDHA5Q9Y5H7 936 aa10.71□□□□□ -0.7
PTCHD4-201ENST00000339488 DCDC2CA8MYV0 355 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 LIN7AO14910 233 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 HNRNPRO43390 633 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 PFDN1O60925 122 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 ZPR1O75312 459 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 SP100P23497 879 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 IGBP1P78318 339 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 RNASELQ05823 741 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 SETDB1Q15047 1291 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 BEND3Q5T5X7 828 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 CRELD2Q6UXH1 353 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 KCNN1Q92952 543 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 PANX2Q96RD6 677 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 MOV10L1Q9BXT6 1211 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 CNOT8Q9UFF9 292 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 DUSP10Q9Y6W6 482 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 PREX1Q8TCU6 1659 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 MACROD2A1Z1Q3 448 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 GYPCP04921 128 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 DESP17661 470 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 PSMA5P28066 241 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 SYKP43405 635 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 ATP8B2P98198 1209 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 PRPF4BQ13523 1007 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 CHST3Q7LGC8 479 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 METTL16Q86W50 562 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 MDM1Q8TC05 714 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 SMCR8Q8TEV9 937 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 RAPGEF5Q92565 580 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 KIFAP3Q92845 792 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 FGD4Q96M96 766 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 TRIM7Q9C029 511 aa10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 NKX1-2Q9UD57 310 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-201ENST00000339488 RIMS1Q86UR5 1692 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ABCC6O95255 1503 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 TRIM37O94972 964 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 LUC7L3O95232 432 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 FAM200BP0CF97 657 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ATP2A2P16615 1042 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 RPL13P26373 211 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 CARSP49589 748 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 DNA2P51530 1060 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 MECOMQ03112 1051 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 SFSWAPQ12872 951 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 PABPC1LQ4VXU2 614 aaKnown RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 LACTB2Q53H82 288 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 FNBP4Q8N3X1 1017 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 SLC35B4Q969S0 331 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 OPTNQ96CV9 577 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 NACA2Q9H009 215 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 IGF2BP3O00425 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 TRAPPC3O43617 180 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 NDUFB5O43674 189 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 KRT16P08779 473 aa10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 ALOX15P16050 662 aaPredicted RBP10.69□□□□□ -0.7
PTCHD4-201ENST00000339488 CCNFP41002 786 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms