RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 BIN1O00499 593 aa25.64■■□□□ 1.69
PDLIM2-203ENST00000339162 SMARCA1P28370 1054 aa25.64■■□□□ 1.69
PDLIM2-203ENST00000339162 STX1AQ16623 288 aa25.64■■□□□ 1.69
PDLIM2-203ENST00000339162 CIAPIN1Q6FI81 312 aa25.64■■□□□ 1.69
PDLIM2-203ENST00000339162 AGBL3Q8NEM8 1001 aa25.64■■□□□ 1.69
PDLIM2-203ENST00000339162 KANSL2Q9H9L4 492 aa25.64■■□□□ 1.69
PDLIM2-203ENST00000339162 CCDC194A0A1B0GVG4 234 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 SMCO2A6NFE2 343 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 METTL16Q86W50 562 aaKnown RBP25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 PDILTQ8N807 584 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 COA7Q96BR5 231 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 MYH4Q9Y623 1939 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 GH2P01242 217 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 ICA1Q05084 483 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 NBPF9Q3BBW0 867 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 SPDYE2Q495Y8 402 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 ADGRF4Q8IZF3 695 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 ZMYND12Q9H0C1 365 aa25.63■■□□□ 1.69
PDLIM2-203ENST00000339162 ADCY5O95622 1261 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 RASSF7Q02833 373 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 INF2Q27J81 1249 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 TMEM39BQ9GZU3 492 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 JMJD4Q9H9V9 463 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 FAM13BQ9NYF5 915 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 CNTNAP1P78357 1384 aa25.62■■□□□ 1.69
PDLIM2-203ENST00000339162 POLR2DO15514 142 aaKnown RBP25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 PTGER2P43116 358 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 ISM2Q6H9L7 571 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 TMEM179Q6ZVK1 233 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 DAGLBQ8NCG7 672 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 EPSTI1Q96J88 318 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 TIGD1Q96MW7 591 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 VWA3AA6NCI4 1184 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 TRAPPC10P48553 1259 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 PNOCQ13519 176 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 ZNF579Q8NAF0 562 aaKnown RBP25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 CNNM3Q8NE01 707 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 FAM151AQ8WW52 585 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 NYAP2Q9P242 653 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 CD2APQ9Y5K6 639 aa25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 BRCA1P38398 1863 aaKnown RBP25.61■■□□□ 1.69
PDLIM2-203ENST00000339162 FOXN1O15353 648 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 RBM26Q5T8P6 1007 aaKnown RBP25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 KRBA2Q6ZNG9 492 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 NLGN2Q8NFZ4 835 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 UPF1Q92900 1129 aaKnown RBP eCLIP25.6■■□□□ 1.694e-7■■■■■ 26.8
PDLIM2-203ENST00000339162 FER1L6Q2WGJ9 1857 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 SRCAPQ6ZRS2 3230 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 USP17L10C9JJH3 530 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 WNT10BO00744 389 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 ATP2C1P98194 919 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 GALNT17Q6IS24 598 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 CCDC12Q8WUD4 166 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 MKL1Q969V6 931 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 ANO10Q9NW15 660 aa25.6■■□□□ 1.69
PDLIM2-203ENST00000339162 SLFN13Q68D06 897 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 C6orf50Q9HD87 102 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 BMP15O95972 392 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 EGFRP00533 1210 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 SLC1A4P43007 532 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 PRELPP51888 382 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 DPCR1Q3MIW9 517 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 GPATCH4Q5T3I0 446 aaKnown RBP25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 MIGA2Q7L4E1 593 aa25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 NUP88Q99567 741 aaPredicted RBP25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 BIN2Q9UBW5 565 aaPredicted RBP25.59■■□□□ 1.69
PDLIM2-203ENST00000339162 PPP1R11O60927 126 aaPredicted RBP25.58■■□□□ 1.69
PDLIM2-203ENST00000339162 IL17AQ16552 155 aa25.58■■□□□ 1.69
PDLIM2-203ENST00000339162 SYMPKQ92797 1274 aaKnown RBP25.58■■□□□ 1.69
PDLIM2-203ENST00000339162 MYOZ2Q9NPC6 264 aa25.58■■□□□ 1.69
PDLIM2-203ENST00000339162 SERTAD1Q9UHV2 236 aa25.58■■□□□ 1.69
PDLIM2-203ENST00000339162 ZRSR1Q15695 479 aaKnown RBP25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 PPP4R3BQ5MIZ7 849 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 FERMT2Q96AC1 680 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 TMEM260Q9NX78 707 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 A0A087X0B3 334 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 F5H6K3 240 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 GNA11P29992 359 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 KLRC3Q07444 240 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 IQCB1Q15051 598 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 JAKMIP3Q5VZ66 844 aa25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 HERC5Q9UII4 1024 aaKnown RBP25.57■■□□□ 1.68
PDLIM2-203ENST00000339162 COL2A1P02458 1487 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 GRAMD1CQ8IYS0 662 aa25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 MTMR14Q8NCE2 650 aa25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 PNMA6FA0A0J9YX94 578 aa25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 A0A1W2PRG0 241 aa25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 MYO1BO43795 1136 aa25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 MORC2Q9Y6X9 1032 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-203ENST00000339162 TNIP1Q15025 636 aa25.55■■□□□ 1.68
PDLIM2-203ENST00000339162 C4orf32Q8N8J7 132 aa25.55■■□□□ 1.68
PDLIM2-203ENST00000339162 ZBED3Q96IU2 234 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-203ENST00000339162 GJA3Q9Y6H8 435 aa25.55■■□□□ 1.68
PDLIM2-203ENST00000339162 DHX58Q96C10 678 aa25.55■■□□□ 1.68
PDLIM2-203ENST00000339162 CAVIN2O95810 425 aa25.54■■□□□ 1.68
PDLIM2-203ENST00000339162 ECE1P42892 770 aa25.54■■□□□ 1.68
PDLIM2-203ENST00000339162 CEP57L1Q8IYX8 460 aa25.54■■□□□ 1.68
PDLIM2-203ENST00000339162 SPICE1Q8N0Z3 855 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms