RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TACC1O75410 805 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 ZNF18P17022 549 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 FAM71BQ8TC56 605 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 FAM208AQ9UK61 1670 aaKnown RBP15.82■□□□□ 0.12
PCDH8-201ENST00000338862 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
PCDH8-201ENST00000338862 HSF2BPO75031 334 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 CKAP4Q07065 602 aaKnown RBP15.82■□□□□ 0.12
PCDH8-201ENST00000338862 TUBGCP2Q9BSJ2 902 aa15.82■□□□□ 0.12
PCDH8-201ENST00000338862 TECP42680 631 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 LRRC41Q15345 812 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 LRP10Q7Z4F1 713 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 IFIH1Q9BYX4 1025 aaKnown RBP15.81■□□□□ 0.12
PCDH8-201ENST00000338862 SEPT11Q9NVA2 429 aaKnown RBP15.81■□□□□ 0.12
PCDH8-201ENST00000338862 ATP6V1AP38606 617 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 NAPAP54920 295 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 IRX3P78415 501 aaPredicted RBP15.81■□□□□ 0.12
PCDH8-201ENST00000338862 TBX2Q13207 712 aaPredicted RBP15.81■□□□□ 0.12
PCDH8-201ENST00000338862 EZH2Q15910 746 aaKnown RBP15.81■□□□□ 0.12
PCDH8-201ENST00000338862 IQCEQ6IPM2 695 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 AMOTL1Q8IY63 956 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 ISCA1Q9BUE6 129 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 L1RE1Q9UN81 338 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 ADAMTS2O95450 1211 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 CCDC152Q4G0S7 254 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 ZNF444Q8N0Y2 327 aaPredicted RBP15.81■□□□□ 0.12
PCDH8-201ENST00000338862 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
PCDH8-201ENST00000338862 SMIM23A6NLE4 172 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 MDM2Q00987 491 aaPredicted RBP15.8■□□□□ 0.12
PCDH8-201ENST00000338862 PRPF4BQ13523 1007 aaKnown RBP15.8■□□□□ 0.12
PCDH8-201ENST00000338862 SGMS1Q86VZ5 419 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 PPP1R3GB7ZBB8 358 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 PLEKP08567 350 aaPredicted RBP15.8■□□□□ 0.12
PCDH8-201ENST00000338862 TFAP4Q01664 338 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 CHRNDQ07001 517 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 TMC4Q7Z404 712 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 SH2D3CQ8N5H7 860 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 RTL9Q8NET4 1388 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 GNAT2P19087 354 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 MAGEA1P43355 309 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 RASGRP2Q7LDG7 609 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 NELFCDQ8IXH7 590 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 SELENOOQ9BVL4 669 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 TRIM31Q9BZY9 425 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 LACRTQ9GZZ8 138 aa15.8■□□□□ 0.12
PCDH8-201ENST00000338862 MEGF6O75095 1541 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 RASSF7Q02833 373 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 PDCLQ13371 301 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 TCERG1LQ5VWI1 586 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 HAUS4Q9H6D7 363 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 NHEJ1Q9H9Q4 299 aaPredicted RBP15.79■□□□□ 0.12
PCDH8-201ENST00000338862 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 GOLGA6L10A6NI86 522 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 C8orf74Q6P047 294 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 GTPBP6O43824 516 aaPredicted RBP15.79■□□□□ 0.12
PCDH8-201ENST00000338862 SCG2P13521 617 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 NFRKBQ6P4R8 1299 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 RNF26Q9BY78 433 aaPredicted RBP15.79■□□□□ 0.12
PCDH8-201ENST00000338862 CCDC113Q9H0I3 377 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
PCDH8-201ENST00000338862 BACH1O14867 736 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 MCM3P25205 808 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 SUSD4Q5VX71 490 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 PACSIN2Q9UNF0 486 aaPredicted RBP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 JRKLQ9Y4A0 524 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 ERLIN2O94905 339 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 BMP15O95972 392 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 OTUD6BQ8N6M0 293 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 CNOT6LQ96LI5 555 aaKnown RBP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 GOPCQ9HD26 462 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 PPANQ9NQ55 473 aaKnown RBP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 JCADQ9P266 1359 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 ERVV-2B6SEH9 535 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 HGSO14964 777 aaPredicted RBP15.78■□□□□ 0.12
PCDH8-201ENST00000338862 FCER1AP12319 257 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 KIF5BP33176 963 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 MB21D1Q8N884 522 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
PCDH8-201ENST00000338862 NUTM2BA6NNL0 878 aaPredicted RBP15.77■□□□□ 0.12
PCDH8-201ENST00000338862 NUTM2EB1AL46 878 aaPredicted RBP15.77■□□□□ 0.12
PCDH8-201ENST00000338862 RDXP35241 583 aaKnown RBP15.77■□□□□ 0.12
PCDH8-201ENST00000338862 ADGRA1Q86SQ6 560 aa15.77■□□□□ 0.12
PCDH8-201ENST00000338862 TAX1BP1Q86VP1 789 aa15.77■□□□□ 0.12
PCDH8-201ENST00000338862 SRBD1Q8N5C6 995 aaKnown RBP15.77■□□□□ 0.12
PCDH8-201ENST00000338862 RRP36Q96EU6 259 aaKnown RBP15.77■□□□□ 0.12
PCDH8-201ENST00000338862 CAPS2Q9BXY5 557 aa15.77■□□□□ 0.12
PCDH8-201ENST00000338862 CAPN7Q9Y6W3 813 aa15.77■□□□□ 0.12
PCDH8-201ENST00000338862 XDHP47989 1333 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms