RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 FASTKD5Q7L8L6 764 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 FBXO33Q7Z6M2 555 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 FAM151AQ8WW52 585 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
UBE2D3-202ENST00000338145 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 A0A1B0GUL6 1792 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 INPP5BP32019 993 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 PTSQ03393 145 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 MOGSQ13724 837 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 APOBEC3HQ6NTF7 200 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 PRICKLE2Q7Z3G6 844 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 PAWRQ96IZ0 340 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 MTMR10Q9NXD2 777 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 SCHIP1Q9P0W5 487 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 IQSEC3Q9UPP2 1182 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-202ENST00000338145 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 TNPO2O14787 897 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 CYP2C8P10632 490 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 FOXK2Q01167 660 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 CHAF1AQ13111 956 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 GPAT2Q6NUI2 795 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 TDHQ8IZJ6 230 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 COA7Q96BR5 231 aa11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 NXF1Q9UBU9 619 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 NOVA2Q9UNW9 492 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-202ENST00000338145 GRM8O00222 908 aa11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 ELNP15502 786 aa11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 GRIK5Q16478 980 aa11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 BEND3Q5T5X7 828 aa11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 ZNF295-AS1Q8N0V1 137 aa11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 TSR2Q969E8 191 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 COL25A1Q9BXS0 654 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 NIFKQ9BYG3 293 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 PRKRIP1Q9H875 184 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 DYRK1BQ9Y463 629 aa11.63□□□□□ -0.55
UBE2D3-202ENST00000338145 A0A0G2JLL6 359 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 SWI5Q1ZZU3 235 aa11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 PRRT2Q7Z6L0 340 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 SMCR8Q8TEV9 937 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 C9orf78Q9NZ63 289 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-202ENST00000338145 POU4F2Q12837 409 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 Q7L0L9 218 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.61□□□□□ -0.554e-11■□□□□ 10.1
UBE2D3-202ENST00000338145 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.558e-9■■□□□ 13.6
UBE2D3-202ENST00000338145 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 MGAMO43451 1857 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
UBE2D3-202ENST00000338145 IL16Q14005 1332 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 ALDH1L1O75891 902 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 PDE8BO95263 885 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 HMGCRP04035 888 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 MAGEA10P43363 369 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 FAM109BQ6ICB4 259 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 SCYL3Q8IZE3 742 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 PUS3Q9BZE2 481 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 UBE2OQ9C0C9 1292 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 C11orf49Q9H6J7 331 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 ZMYND8Q9ULU4 1186 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 ZHX2Q9Y6X8 837 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
UBE2D3-202ENST00000338145 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 PTPRAP18433 802 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 TCP10Q12799 353 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 FAM110CQ1W6H9 321 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 METTL24Q5JXM2 366 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 GADL1Q6ZQY3 521 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 CCDC155Q8N6L0 562 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 C1orf216Q8TAB5 229 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 GMCL1Q96IK5 515 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 TIMMDC1Q9NPL8 285 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 ZMIZ1Q9ULJ6 1067 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
UBE2D3-202ENST00000338145 F6X3S4 739 aa11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 IFIT1P09914 478 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 RHOQP17081 205 aa11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 PSMA6P60900 246 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 TEAD4Q15561 434 aa11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 CDC42EP5Q6NZY7 148 aa11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 SLC9A9Q8IVB4 645 aa11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 AGTPBP1Q9UPW5 1226 aa11.58□□□□□ -0.56
UBE2D3-202ENST00000338145 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
UBE2D3-202ENST00000338145 H3BM21 787 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms