RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 HOXC10Q9NYD6 342 aa22.67■■□□□ 1.22
UBE2E2-201ENST00000335798 ZBTB43O43298 467 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 TBC1D8O95759 1140 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 BCRP11274 1271 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 SLC35G1Q2M3R5 365 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 C17orf99Q6UX52 265 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 RAB11FIP4Q86YS3 637 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 REPS2Q8NFH8 660 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 SMCR8Q8TEV9 937 aaPredicted RBP22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 GTF3C2Q8WUA4 911 aaPredicted RBP22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 CHURC1Q8WUH1 139 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 TXNRD2Q9NNW7 524 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 PRR12Q9ULL5 1215 aa22.66■■□□□ 1.22
UBE2E2-201ENST00000335798 CNMDO75829 334 aa22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 SLC16A2P36021 539 aa22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 GCLCP48506 637 aaPredicted RBP22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 FANCBQ8NB91 859 aa22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 CPVLQ9H3G5 476 aa22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 FAM217BQ9NTX9 383 aaPredicted RBP22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 RBPJLQ9UBG7 517 aa22.65■■□□□ 1.22
UBE2E2-201ENST00000335798 GOLGA8BA8MQT2 603 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 VWA5AO00534 786 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 PDIA3P30101 505 aaKnown RBP22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 ANKRD1Q15327 319 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 NOM1Q5C9Z4 860 aaKnown RBP22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 IL27Q8NEV9 243 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 CTCFLQ8NI51 663 aaPredicted RBP22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 KIFC2Q96AC6 838 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 ZNF274Q96GC6 653 aaPredicted RBP22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 LARP6Q9BRS8 491 aaKnown RBP22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 BEGAINQ9BUH8 593 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 MORF4L1Q9UBU8 362 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 CPA4Q9UI42 421 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 TPCN1Q9ULQ1 816 aa22.64■■□□□ 1.22
UBE2E2-201ENST00000335798 DOCK3Q8IZD9 2030 aa22.64■■□□□ 1.21
UBE2E2-201ENST00000335798 KLRF2D3W0D1 207 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 PEX10O60683 326 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 KIF5BP33176 963 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 SYDE2Q5VT97 1194 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 SYNE3Q6ZMZ3 975 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 NBPF11Q86T75 865 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 CCDC144CPQ8IYA2 1237 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 UBA5Q9GZZ9 404 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 SLC38A10Q9HBR0 1119 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 BTBD7Q9P203 1132 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 ISY1Q9ULR0 285 aaKnown RBP22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 PLXNB2O15031 1838 aa22.63■■□□□ 1.21
UBE2E2-201ENST00000335798 RBBP6Q7Z6E9 1792 aaKnown RBP22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 CYTH3O43739 400 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 CDC27P30260 824 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 FAM110CQ1W6H9 321 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 ANKRD13CQ8N6S4 541 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 MB21D1Q8N884 522 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 RANBP17Q9H2T7 1088 aaKnown RBP22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 RIOX1Q9H6W3 641 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 ZNF214Q9UL59 606 aaPredicted RBP22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 RABGAP1Q9Y3P9 1069 aa22.62■■□□□ 1.21
UBE2E2-201ENST00000335798 GOLGA8AA7E2F4 631 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 PLEKHA8P1O95397 391 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 FDX1P10109 184 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 METAP2P50579 478 aaKnown RBP eCLIP22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 IKQ13123 557 aaPredicted RBP22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 TMEM132BQ14DG7 1078 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 RTN1Q16799 776 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 TMTC3Q6ZXV5 915 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 ADGRF4Q8IZF3 695 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 MTMR8Q96EF0 704 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 RBM28Q9NW13 759 aaKnown RBP22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 TSKSQ9UJT2 592 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 CASP8AP2Q9UKL3 1982 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 ZNF536O15090 1300 aa22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 ZNFX1Q9P2E3 1918 aaKnown RBP22.61■■□□□ 1.21
UBE2E2-201ENST00000335798 ATP2A1O14983 1001 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 CD2BP2O95400 341 aaKnown RBP22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 LARGE1O95461 756 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 HSPA1AP0DMV8 641 aaKnown RBP22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 HSPA1BP0DMV9 641 aaKnown RBP22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 SMARCA1P28370 1054 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 ERVK-9P63128 1117 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 ERVK-24P63145 666 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 FUT2Q10981 343 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 PPP2R5BQ15173 497 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 Q3C1V9 767 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 SAMD1Q6SPF0 538 aaPredicted RBP22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 SRBD1Q8N5C6 995 aaKnown RBP22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 SPZ1Q9BXG8 430 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 JMJD4Q9H9V9 463 aa22.6■■□□□ 1.21
UBE2E2-201ENST00000335798 GPR25O00155 361 aa22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 FOXN1O15353 648 aa22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 GNAQP50148 359 aa22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 ME3Q16798 604 aa22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 LZTS2Q9BRK4 669 aa22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 PAGR1Q9BTK6 254 aa22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 NAP1L2Q9ULW6 460 aaPredicted RBP22.59■■□□□ 1.21
UBE2E2-201ENST00000335798 ADD1P35611 737 aaKnown RBP22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 OAZ1P54368 228 aa22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 SNAP25P60880 206 aa22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 NTRK3Q16288 839 aa22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 CMTR1Q8N1G2 835 aaKnown RBP22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 GPRC5AQ8NFJ5 357 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms