RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 ABRAQ8N0Z2 381 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 SLF1Q9BQI6 1058 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 ZNF214Q9UL59 606 aaPredicted RBP13.33□□□□□ -0.28
C9orf85-201ENST00000334731 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
C9orf85-201ENST00000334731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
C9orf85-201ENST00000334731 NR2E3Q9Y5X4 410 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 TACC3Q9Y6A5 838 aa13.33□□□□□ -0.28
C9orf85-201ENST00000334731 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 EVI5O60447 810 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 FGAP02671 866 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 FCER1AP12319 257 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
C9orf85-201ENST00000334731 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
C9orf85-201ENST00000334731 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
C9orf85-201ENST00000334731 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
C9orf85-201ENST00000334731 GMCL1P1Q8NEA9 526 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 RLFQ13129 1914 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
C9orf85-201ENST00000334731 FGRP09769 529 aa13.31□□□□□ -0.28
C9orf85-201ENST00000334731 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
C9orf85-201ENST00000334731 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
C9orf85-201ENST00000334731 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
C9orf85-201ENST00000334731 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
C9orf85-201ENST00000334731 IL17RBQ9NRM6 502 aa13.31□□□□□ -0.28
C9orf85-201ENST00000334731 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
C9orf85-201ENST00000334731 DDX20Q9UHI6 824 aaKnown RBP13.31□□□□□ -0.28
C9orf85-201ENST00000334731 CEP290O15078 2479 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 ATP2A1O14983 1001 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 HSPD1P10809 573 aaKnown RBP13.3□□□□□ -0.28
C9orf85-201ENST00000334731 COL6A1P12109 1028 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 CYBAP13498 195 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 SDSP20132 328 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 CNGA1P29973 690 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 COPB2P35606 906 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 MAML3Q96JK9 1138 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 MMP19Q99542 508 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 GTF3C3Q9Y5Q9 886 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
C9orf85-201ENST00000334731 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
C9orf85-201ENST00000334731 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 ORC4O43929 436 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 RANBP6O60518 1105 aaKnown RBP13.29□□□□□ -0.28
C9orf85-201ENST00000334731 NMT2O60551 498 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 MSCO60682 206 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 ZBED4O75132 1171 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 PGK2P07205 417 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 BMP3P12645 472 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 KCTD2Q14681 263 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 PRAMEF19Q5SWL8 479 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
C9orf85-201ENST00000334731 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 SLC38A10Q9HBR0 1119 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 STX8Q9UNK0 236 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
C9orf85-201ENST00000334731 RIPK3Q9Y572 518 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 PFASO15067 1338 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 CCDC171Q6TFL3 1326 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 MYH8P13535 1937 aa13.29□□□□□ -0.28
C9orf85-201ENST00000334731 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 TIE1P35590 1138 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 NOVP48745 357 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 ZNF792Q3KQV3 632 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 LCE2DQ5TA82 110 aaPredicted RBP13.28□□□□□ -0.28
C9orf85-201ENST00000334731 CPXCR1Q8N123 301 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 SLC39A7Q92504 469 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 GMCL1Q96IK5 515 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
C9orf85-201ENST00000334731 RAVER2Q9HCJ3 691 aaKnown RBP13.28□□□□□ -0.28
C9orf85-201ENST00000334731 SEPT4O43236 478 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 MCCP23508 829 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 SLC1A4P43007 532 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 CHMP4CQ96CF2 233 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 TINF2Q9BSI4 451 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 RBM27Q9P2N5 1060 aaKnown RBP13.27□□□□□ -0.29
C9orf85-201ENST00000334731 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
C9orf85-201ENST00000334731 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
C9orf85-201ENST00000334731 PLA2G6O60733 806 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 FDX1P10109 184 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 C7P10643 843 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 STAT2P52630 851 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 OAZ1P54368 228 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
C9orf85-201ENST00000334731 HAND2P61296 217 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 IRX6P78412 446 aaPredicted RBP13.26□□□□□ -0.29
C9orf85-201ENST00000334731 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
C9orf85-201ENST00000334731 RCSD1Q6JBY9 416 aa13.26□□□□□ -0.29
C9orf85-201ENST00000334731 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms