RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PDIA6Q15084 440 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 NME9Q86XW9 330 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 FAM126BQ8IXS8 530 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 RPAP2Q8IXW5 612 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 MRPL50Q8N5N7 158 aaKnown RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 RFFLQ8WZ73 363 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 RPGRQ92834 1020 aaKnown RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 RIPOR3Q96MK2 946 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 NLRP3Q96P20 1036 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PRORYQ9H606 182 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 IGSF9Q9P2J2 1179 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ZBTB1Q9Y2K1 713 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ASTN1O14525 1302 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 SYNRGQ9UMZ2 1314 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ANHXE9PGG2 379 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PPIP5K2O43314 1243 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 DDAH2O95865 285 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 RECKO95980 971 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 SUPT20HL2P0C7V6 817 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CASP7P55210 303 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CCNA1P78396 465 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CREMQ03060 361 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 SLC14A1Q13336 389 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ADAM15Q13444 863 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 MFSD14CQ5VZR4 134 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CNKSR3Q6P9H4 555 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 DZIP3Q86Y13 1208 aaKnown RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 SLF2Q8IX21 1173 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 FAM177A1Q8N128 213 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CELF5Q8N6W0 485 aaKnown RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 IRF7Q92985 503 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 VWCEQ96DN2 955 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 SLC10A4Q96EP9 437 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 AGBL1Q96MI9 1066 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 NELL2Q99435 816 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 TREX2Q9BQ50 279 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 LBHD1Q9BQE6 289 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 NSUN3Q9H649 340 aaKnown RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 TRPV4Q9HBA0 871 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PTPRBP23467 1997 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 BTBD19C9JJ37 291 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 APBB1O00213 710 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 WNT10BO00744 389 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PTPREP23469 700 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 TRAPPC10P48553 1259 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PPP4CP60510 307 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ITIH3Q06033 890 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PDAP1Q13442 181 aaKnown RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CLPPQ16740 277 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 LRRC26Q2I0M4 334 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 PIP4P1Q86T03 277 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 NLRP10Q86W26 655 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 GJD3Q8N144 294 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CLUAP1Q96AJ1 413 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ZNF428Q96B54 188 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ZNF689Q96CS4 500 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ACSBG1Q96GR2 724 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CEP295NLQ96MC4 621 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 KLHL5Q96PQ7 755 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 KATNBL1Q9H079 304 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 UBE2ZQ9H832 354 aaPredicted RBP2.1□□□□□ -2.07
LINC00643-201ENST00000334389 OBP2AQ9NY56 170 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 CHPF2Q9P2E5 772 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 MSRB2Q9Y3D2 182 aa2.1□□□□□ -2.07
LINC00643-201ENST00000334389 ZBED9Q6R2W3 1325 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 SOWAHBA6NEL2 793 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 MYO1BO43795 1136 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 PDE8AO60658 829 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 CBFA2T3O75081 653 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 DUSP11O75319 330 aaKnown RBP2.09□□□□□ -2.07
LINC00643-201ENST00000334389 C1SP09871 688 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 ZNF853P0CG23 659 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 CTGFP29279 349 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 AMPHP49418 695 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 USP14P54578 494 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 RHBDL3P58872 404 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 DBX2Q6ZNG2 339 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 Q8N3U1 123 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 USP38Q8NB14 1042 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.09□□□□□ -2.07
LINC00643-201ENST00000334389 AGAP3Q96P47 875 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 OXCT2Q9BYC2 517 aaPredicted RBP2.09□□□□□ -2.07
LINC00643-201ENST00000334389 POLR3EQ9NVU0 708 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 HYPKQ9NX55 129 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 MYH7BA7E2Y1 1941 aa2.09□□□□□ -2.07
LINC00643-201ENST00000334389 ADGRA3Q8IWK6 1321 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 ENO4A6NNW6 628 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 MBTPS2O43462 519 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 TRPA1O75762 1119 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 CNMDO75829 334 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 DNAJB2P25686 324 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 PCYT1AP49585 367 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 UCNP55089 124 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 ZNF792Q3KQV3 632 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 RABL6Q3YEC7 729 aaPredicted RBP2.09□□□□□ -2.08
LINC00643-201ENST00000334389 KIF6Q6ZMV9 814 aa2.09□□□□□ -2.08
LINC00643-201ENST00000334389 ALYREFQ86V81 257 aaKnown RBP2.09□□□□□ -2.08
LINC00643-201ENST00000334389 NBPF5PQ86XG9 351 aaPredicted RBP2.09□□□□□ -2.08
LINC00643-201ENST00000334389 TMC8Q8IU68 726 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms