RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 PES1O00541 588 aaKnown RBP13.91□□□□□ -0.18
VPS33B-201ENST00000333371 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 MECOMQ03112 1051 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 PAK1Q13153 545 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 KCNJ12Q14500 433 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 KRT9P35527 623 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 TCP11X2Q5H9J9 407 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 SLC10A5Q5PT55 438 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 NCAPH2Q6IBW4 605 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 STAG2Q8N3U4 1231 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 BRIP1Q9BX63 1249 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 NAA15Q9BXJ9 866 aaKnown RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 CTAGE9A4FU28 777 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 RPN1P04843 607 aaKnown RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 UBXN1Q04323 297 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
VPS33B-201ENST00000333371 NOA1Q8NC60 698 aaKnown RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS33B-201ENST00000333371 THSD7AQ9UPZ6 1657 aa13.9□□□□□ -0.19
VPS33B-201ENST00000333371 ENC1O14682 589 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
VPS33B-201ENST00000333371 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
VPS33B-201ENST00000333371 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-201ENST00000333371 DDAH1O94760 285 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 USP17L8P0C7I0 530 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 RFC4P35249 363 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 RCSD1Q6JBY9 416 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
VPS33B-201ENST00000333371 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-201ENST00000333371 TMEM60Q9H2L4 133 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 PDE11AQ9HCR9 933 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 HDAC6Q9UBN7 1215 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 RWDD2AQ9UIY3 292 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 GUCA1BQ9UMX6 200 aa13.89□□□□□ -0.19
VPS33B-201ENST00000333371 CCDC151A5D8V7 595 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 BMP15O95972 392 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 VSNL1P62760 191 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 PFKFB3Q16875 520 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-201ENST00000333371 BEND6Q5SZJ8 279 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-201ENST00000333371 LRRC15Q8TF66 581 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 DYNLL2Q96FJ2 89 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 CPVLQ9H3G5 476 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 TTC26A0AVF1 554 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 SEMA3EO15041 775 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 ATP8B1O43520 1251 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 FGRP09769 529 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 CALM1P0DP23 149 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 CALM2P0DP24 149 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 CALM3P0DP25 149 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 STAT6P42226 847 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-201ENST00000333371 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 C4orf32Q8N8J7 132 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 RASSF8Q8NHQ8 419 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 ITIH6Q6UXX5 1313 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
VPS33B-201ENST00000333371 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-201ENST00000333371 LRRC10BA6NIK2 292 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 MAP2K7O14733 419 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
VPS33B-201ENST00000333371 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
VPS33B-201ENST00000333371 SLC35G1Q2M3R5 365 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 CT47A1Q5JQC4 288 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-201ENST00000333371 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 JAKMIP3Q5VZ66 844 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 CYP26C1Q6V0L0 522 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 ANKRD2Q9GZV1 360 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 TTF2Q9UNY4 1162 aaKnown RBP13.87□□□□□ -0.19
VPS33B-201ENST00000333371 TAF1LQ8IZX4 1826 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 FECHP22830 423 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 KLK7P49862 253 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 GPIHBP1Q8IV16 184 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 BLIDQ8IZY5 108 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 CEP112Q8N8E3 955 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 IL17RBQ9NRM6 502 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 ADAM21Q9UKJ8 722 aa13.87□□□□□ -0.19
VPS33B-201ENST00000333371 COL24A1Q17RW2 1714 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 BRD3Q15059 726 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 INF2Q27J81 1249 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 MYH1P12882 1939 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 MYH10P35580 1976 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 AFF2P51816 1311 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 LAMB1P07942 1786 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms