RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 UBE3CQ15386 1083 aa17.57■□□□□ 0.4
SLIT3-201ENST00000332966 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
SLIT3-201ENST00000332966 SF3A3Q12874 501 aaKnown RBP eCLIP17.56■□□□□ 0.4
SLIT3-201ENST00000332966 DYMQ7RTS9 669 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 ANKRD13CQ8N6S4 541 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 WHAMMQ8TF30 809 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 KLHL14Q9P2G3 628 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 HMGB1P1B2RPK0 211 aaPredicted RBP17.56■□□□□ 0.4
SLIT3-201ENST00000332966 DHTKD1Q96HY7 919 aaPredicted RBP17.56■□□□□ 0.4
SLIT3-201ENST00000332966 M0R2C6 588 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 IFNAR1P17181 557 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 PPARAQ07869 468 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 TRAPPC10P48553 1259 aa17.56■□□□□ 0.4
SLIT3-201ENST00000332966 CNOT6LQ96LI5 555 aaKnown RBP17.56■□□□□ 0.4
SLIT3-201ENST00000332966 RNF26Q9BY78 433 aaPredicted RBP17.56■□□□□ 0.4
SLIT3-201ENST00000332966 KRT31Q15323 416 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 HGSO14964 777 aaPredicted RBP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 RPSAP08865 295 aaKnown RBP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 ZNF622Q969S3 477 aaKnown RBP eCLIP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 LSM14BQ9BX40 385 aaKnown RBP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 VIPAS39Q9H9C1 493 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 MAGEF1Q9HAY2 307 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 DENND2AQ9ULE3 1009 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 SNX29Q8TEQ0 813 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 CALUO43852 315 aaPredicted RBP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 CIB2O75838 187 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 ERCC3P19447 782 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 ARID4AP29374 1257 aaPredicted RBP17.55■□□□□ 0.4
SLIT3-201ENST00000332966 USP14P54578 494 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 RASSF7Q02833 373 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
SLIT3-201ENST00000332966 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 CIAO1O76071 339 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 EHHADHQ08426 723 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 HERC4Q5GLZ8 1057 aaPredicted RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 NHEJ1Q9H9Q4 299 aaPredicted RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PARP3Q9Y6F1 533 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 COBLO75128 1261 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PEX19P40855 299 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PDCLQ13371 301 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 COG1Q8WTW3 980 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 ABHD10Q9NUJ1 306 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PDE8AO60658 829 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PTPREP23469 700 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 RBBP5Q15291 538 aaKnown RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 DZIP3Q86Y13 1208 aaKnown RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 ARHGEF2Q92974 986 aaKnown RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 MCUR1Q96AQ8 359 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PAGE5Q96GU1 130 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 TNKSO95271 1327 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 ZPR1O75312 459 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 STX2P32856 288 aa17.54■□□□□ 0.4
SLIT3-201ENST00000332966 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
SLIT3-201ENST00000332966 FRMD3A2A2Y4 597 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 VSNL1P62760 191 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 GLE1Q53GS7 698 aaKnown RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 CCDC105Q8IYK2 499 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 ARHGAP24Q8N264 748 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 ZNF579Q8NAF0 562 aaKnown RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 OSBP2Q969R2 916 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 ASIC3Q9UHC3 531 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 FRMD4BQ9Y2L6 1034 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 TCP11X2Q5H9J9 407 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 CUEDC2Q9H467 287 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 CNOT10Q9H9A5 744 aaKnown RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 MRPL12P52815 198 aaKnown RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 PLCB3Q01970 1234 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 TCP11Q8WWU5 503 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 THAP9Q9H5L6 903 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 AP5Z1O43299 807 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 MYL1P05976 194 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
SLIT3-201ENST00000332966 GUCY2CP25092 1073 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 DPH5Q9H2P9 285 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 CTTNBP2NLQ9P2B4 639 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 E9PCH4 1651 aa17.53■□□□□ 0.4
SLIT3-201ENST00000332966 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.4
SLIT3-201ENST00000332966 KIF1CO43896 1103 aaKnown RBP17.52■□□□□ 0.4
SLIT3-201ENST00000332966 A1BGP04217 495 aa17.52■□□□□ 0.4
SLIT3-201ENST00000332966 SCG2P13521 617 aa17.52■□□□□ 0.4
SLIT3-201ENST00000332966 TRAF1Q13077 416 aa17.52■□□□□ 0.4
SLIT3-201ENST00000332966 PPP2R5AQ15172 486 aa17.52■□□□□ 0.4
SLIT3-201ENST00000332966 MYOCDQ8IZQ8 938 aa17.52■□□□□ 0.4
SLIT3-201ENST00000332966 WDR66Q8TBY9 1149 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms