RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 TMTC3Q6ZXV5 915 aa9.77□□□□□ -0.84
LIMK2-201ENST00000331728 LIMA1Q9UHB6 759 aaKnown RBP9.77□□□□□ -0.84
LIMK2-201ENST00000331728 DDX60Q8IY21 1712 aaKnown RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 A0A087X0B3 334 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 ERVV-1B6SEH8 477 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 AKR1B10O60218 316 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 RNF40O75150 1001 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 TACC1O75410 805 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 TFRCP02786 760 aaKnown RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 IL6STP40189 918 aaPredicted RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 ATP2C1P98194 919 aaPredicted RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 LRRC31Q6UY01 552 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 DZIP1Q86YF9 867 aaKnown RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 NOA1Q8NC60 698 aaKnown RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 MST1RQ04912 1400 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 CAMTA1Q9Y6Y1 1673 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 PBX1P40424 430 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 PAFAH1B1P43034 410 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 ERVK-24P63145 666 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 SUSD4Q5VX71 490 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 APTXQ7Z2E3 356 aaKnown RBP9.77□□□□□ -0.85
LIMK2-201ENST00000331728 BLIDQ8IZY5 108 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 ALS2CR12Q96Q35 445 aa9.77□□□□□ -0.85
LIMK2-201ENST00000331728 BICDL2A1A5D9 508 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 TRIM49BA6NDI0 452 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 LRRIQ3A6PVS8 624 aaPredicted RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 PPFIA4O75335 1185 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 CYP19A1P11511 503 aaPredicted RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 FGFR2P21802 821 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 DNM2P50570 870 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 WDR93Q6P2C0 686 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 CERS3Q8IU89 383 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 GPKOWQ92917 476 aaPredicted RBP eCLIP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 RPGRIP1Q96KN7 1286 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 VIPAS39Q9H9C1 493 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 MCM9Q9NXL9 1143 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 CORO7P57737 925 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 PDE4DQ08499 809 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 EARS2Q5JPH6 523 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 SPATA20Q8TB22 786 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 RASGRP4Q8TDF6 673 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 CHP1Q99653 195 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 STX8Q9UNK0 236 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 MYH7P12883 1935 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 TTC26A0AVF1 554 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 B4DLN1 442 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 ZMYND10O75800 440 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 EEF1GP26641 437 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 PRCPP42785 496 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 GNAQP50148 359 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 DNA2P51530 1060 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 AMPD3Q01432 767 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 TDRD12Q587J7 1177 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 DNAJC21Q5F1R6 531 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 CACNA2D4Q7Z3S7 1137 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 FAM76AQ8TAV0 307 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 NOC3LQ8WTT2 800 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 SECISBP2LQ93073 1101 aaKnown RBP9.76□□□□□ -0.85
LIMK2-201ENST00000331728 NUP58Q9BVL2 599 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 FAM107BQ9H098 131 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 JRKLQ9Y4A0 524 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 ECM29Q5VYK3 1845 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 XDHP47989 1333 aa9.76□□□□□ -0.85
LIMK2-201ENST00000331728 SHTN1A0MZ66 631 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 ZNF444Q8N0Y2 327 aaPredicted RBP9.75□□□□□ -0.85
LIMK2-201ENST00000331728 MB21D1Q8N884 522 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 CCDC87Q9NVE4 849 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 HDAC6Q9UBN7 1215 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 TRIM10Q9UDY6 481 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 MYH8P13535 1937 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 LGALS16A8MUM7 142 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 PCP11498 1178 aaKnown RBP9.75□□□□□ -0.85
LIMK2-201ENST00000331728 BRINP3Q76B58 766 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 PACS2Q86VP3 889 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 MMRN2Q9H8L6 949 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 SRGAP2O75044 1071 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 FECHP22830 423 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 ARHGAP25P42331 645 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 USP14P54578 494 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 EFCAB13Q8IY85 973 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 TUBGCP2Q9BSJ2 902 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 TSGA10Q9BZW7 698 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 PLEKHA4Q9H4M7 779 aa9.75□□□□□ -0.85
LIMK2-201ENST00000331728 LUC7LQ9NQ29 371 aaKnown RBP9.75□□□□□ -0.85
LIMK2-201ENST00000331728 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 ANKRD65E5RJM6 399 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 AARSP49588 968 aaKnown RBP eCLIP9.74□□□□□ -0.853e-6■■■■■ 61.8
LIMK2-201ENST00000331728 NAPAP54920 295 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 SEC23AQ15436 765 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 PKN1Q16512 942 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 INF2Q27J81 1249 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
LIMK2-201ENST00000331728 GPIHBP1Q8IV16 184 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms