RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 JADE2Q9NQC1 790 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 PSMA7O14818 248 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 LGALS16A8MUM7 142 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 MAGEA9P43362 315 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 FUT2Q10981 343 aa16.39■□□□□ 0.21
SSBP3-201ENST00000326956 REXO2Q9Y3B8 237 aaKnown RBP16.39■□□□□ 0.21
SSBP3-201ENST00000326956 EIF3CLB5ME19 914 aaKnown RBP16.38■□□□□ 0.21
SSBP3-201ENST00000326956 ZMYND10O75800 440 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
SSBP3-201ENST00000326956 TTC31Q49AM3 519 aaPredicted RBP16.38■□□□□ 0.21
SSBP3-201ENST00000326956 EIF3CQ99613 913 aaKnown RBP16.38■□□□□ 0.21
SSBP3-201ENST00000326956 ANAPC4Q9UJX5 808 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 A0A1W2PQC6 194 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 PPFIA4O75335 1185 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 DDAH1O94760 285 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
SSBP3-201ENST00000326956 DNM2P50570 870 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 HPCAL4Q9UM19 191 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 CAPN11Q9UMQ6 739 aa16.38■□□□□ 0.21
SSBP3-201ENST00000326956 CYP2D7A0A087X1C5 515 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 TARSL2A2RTX5 802 aaKnown RBP16.37■□□□□ 0.21
SSBP3-201ENST00000326956 SCG2P13521 617 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 IDEP14735 1019 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.219e-7■■■■■ 61.1
SSBP3-201ENST00000326956 TROAPQ12815 778 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 TNFRSF25Q93038 417 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
SSBP3-201ENST00000326956 DNAJC7Q99615 494 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 MTRQ99707 1265 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 TFR2Q9UP52 801 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
SSBP3-201ENST00000326956 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 DNAJC21Q5F1R6 531 aaKnown RBP16.37■□□□□ 0.21
SSBP3-201ENST00000326956 PAPD7Q5XG87 772 aaKnown RBP16.37■□□□□ 0.21
SSBP3-201ENST00000326956 PLEKHA4Q9H4M7 779 aa16.37■□□□□ 0.21
SSBP3-201ENST00000326956 UBA7P41226 1012 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 HERVK_113P62684 666 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 KIF5AQ12840 1032 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 ARL6IP4Q66PJ3 421 aaKnown RBP16.36■□□□□ 0.21
SSBP3-201ENST00000326956 ADSSL1Q8N142 457 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 FAM76AQ8TAV0 307 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
SSBP3-201ENST00000326956 MACROD2A1Z1Q3 448 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 SYF2O95926 243 aaKnown RBP16.36■□□□□ 0.21
SSBP3-201ENST00000326956 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
SSBP3-201ENST00000326956 CALML3P27482 149 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 SPA17Q15506 151 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 PPM1EQ8WY54 764 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 NUP58Q9BVL2 599 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 MYH3P11055 1940 aa16.36■□□□□ 0.21
SSBP3-201ENST00000326956 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 DTHD1Q6ZMT9 781 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 EXOC1Q9NV70 894 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 CNTNAP5Q8WYK1 1306 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 B4DLN1 442 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 GGCXP38435 758 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
SSBP3-201ENST00000326956 CSGALNACT2Q8N6G5 542 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 RIN2Q8WYP3 895 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-201ENST00000326956 DISC1Q9NRI5 854 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 GOLGA6BA6NDN3 693 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 ANKRD65E5RJM6 399 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
SSBP3-201ENST00000326956 NPY5RQ15761 445 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 ADGRA1Q86SQ6 560 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 IRF2BP1Q8IU81 584 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 NOC3LQ8WTT2 800 aaKnown RBP16.35■□□□□ 0.21
SSBP3-201ENST00000326956 SELENOOQ9BVL4 669 aa16.35■□□□□ 0.21
SSBP3-201ENST00000326956 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 ANO9A1A5B4 782 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 GOLGA6CA6NDK9 693 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 USO1O60763 962 aaKnown RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 GOLGA6DP0CG33 693 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 PLIN2Q99541 437 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 TUBGCP2Q9BSJ2 902 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 NHEJ1Q9H9Q4 299 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 GOLGA6AQ9NYA3 693 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 KIF5BP33176 963 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 CORO7P57737 925 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 IL17AQ16552 155 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 WDR59Q6PJI9 974 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 GSPT2Q8IYD1 628 aaKnown RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 ZNF34Q8IZ26 560 aa16.34■□□□□ 0.21
SSBP3-201ENST00000326956 SECISBP2LQ93073 1101 aaKnown RBP16.34■□□□□ 0.21
SSBP3-201ENST00000326956 CCDC42Q96M95 316 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms