RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 HIP1RO75146 1068 aa23.1■■□□□ 1.29
RNF40-201ENST00000324685 PDZD4Q76G19 769 aaPredicted RBP23.1■■□□□ 1.29
RNF40-201ENST00000324685 PANK4Q9NVE7 773 aa23.1■■□□□ 1.29
RNF40-201ENST00000324685 RBM6P78332 1123 aaKnown RBP23.1■■□□□ 1.29
RNF40-201ENST00000324685 FAM102BQ5T8I3 360 aa23.1■■□□□ 1.29
RNF40-201ENST00000324685 ARMCX3Q9UH62 379 aaPredicted RBP23.1■■□□□ 1.29
RNF40-201ENST00000324685 FAM71BQ8TC56 605 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 METTL14Q9HCE5 456 aaKnown RBP23.09■■□□□ 1.29
RNF40-201ENST00000324685 HMGB1P1B2RPK0 211 aaPredicted RBP23.09■■□□□ 1.29
RNF40-201ENST00000324685 ZNF500O60304 480 aaPredicted RBP23.09■■□□□ 1.29
RNF40-201ENST00000324685 KRT3P12035 628 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 GDAP1L1Q96MZ0 367 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 C1orf112Q9NSG2 853 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 CD2APQ9Y5K6 639 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 hCG_1642624A0A1W2PR95 340 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 GNPTABQ3T906 1256 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 BSPRYQ5W0U4 402 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 RDH13Q8NBN7 331 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 DDX27Q96GQ7 796 aaKnown RBP23.09■■□□□ 1.29
RNF40-201ENST00000324685 HAUS8Q9BT25 410 aa23.09■■□□□ 1.29
RNF40-201ENST00000324685 PSDA5PKW4 1024 aaPredicted RBP23.09■■□□□ 1.29
RNF40-201ENST00000324685 SLC8A1P32418 973 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 YARSP54577 528 aaKnown RBP23.08■■□□□ 1.29
RNF40-201ENST00000324685 PPARDQ03181 441 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 TNNC2P02585 160 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 MAP2K2P36507 400 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 STK32BQ9NY57 414 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 NDUFB9Q9Y6M9 179 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 ABCC10Q5T3U5 1492 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.29
RNF40-201ENST00000324685 OR52Z1P0C646 297 aa23.08■■□□□ 1.29
RNF40-201ENST00000324685 THAP12O43422 761 aa23.08■■□□□ 1.28
RNF40-201ENST00000324685 NR1I2O75469 434 aa23.08■■□□□ 1.28
RNF40-201ENST00000324685 KMT5BQ4FZB7 885 aa23.08■■□□□ 1.28
RNF40-201ENST00000324685 H0YIN7 160 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 A1BGP04217 495 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 SPATA1Q5VX52 437 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 ZBTB8OSQ8IWT0 167 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 LRRC8AQ8IWT6 810 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 DESI2Q9BSY9 194 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 ZMYM3Q14202 1370 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 IFNB1P01574 187 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 PLEKHA4Q9H4M7 779 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 ATF2P15336 505 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 LIG4P49917 911 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 WDR46O15213 610 aaKnown RBP23.07■■□□□ 1.28
RNF40-201ENST00000324685 BUB1O43683 1085 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 DDAH1O94760 285 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 STMN1P16949 149 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 ATF7P17544 494 aaPredicted RBP23.07■■□□□ 1.28
RNF40-201ENST00000324685 TECP42680 631 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 LARGE2Q8N3Y3 721 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 NCAPGQ9BPX3 1015 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 MAGEF1Q9HAY2 307 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 WDR70Q9NW82 654 aa23.07■■□□□ 1.28
RNF40-201ENST00000324685 UIMC1Q96RL1 719 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 ST7Q9NRC1 585 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 NEK8Q86SG6 692 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 PSTPIP2Q9H939 334 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 KDRP35968 1356 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 NEURL1BA8MQ27 555 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 SF3A3Q12874 501 aaKnown RBP eCLIP23.06■■□□□ 1.283e-6■■■■■ 31.7
RNF40-201ENST00000324685 USP28Q96RU2 1077 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 ZSWIM6Q9HCJ5 1215 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 K7ENM7 598 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 RPN1P04843 607 aaKnown RBP23.06■■□□□ 1.28
RNF40-201ENST00000324685 GARSP41250 739 aaKnown RBP23.06■■□□□ 1.28
RNF40-201ENST00000324685 ETF1P62495 437 aaKnown RBP23.06■■□□□ 1.28
RNF40-201ENST00000324685 TCP10Q12799 353 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 NXNQ6DKJ4 435 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 ZNF277Q9NRM2 450 aaPredicted RBP23.06■■□□□ 1.28
RNF40-201ENST00000324685 RIPOR2Q9Y4F9 1068 aa23.06■■□□□ 1.28
RNF40-201ENST00000324685 PASKQ96RG2 1323 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 ARHGAP4P98171 946 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 AS3MTQ9HBK9 375 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 CDC25BP30305 580 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 MED10Q9BTT4 135 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 LONP1P36776 959 aaKnown RBP23.05■■□□□ 1.28
RNF40-201ENST00000324685 RSPH3Q86UC2 560 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 IFNL3Q8IZI9 196 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 TACO1Q9BSH4 297 aaKnown RBP23.05■■□□□ 1.28
RNF40-201ENST00000324685 DPH5Q9H2P9 285 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 MGEA5O60502 916 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 FANCBQ8NB91 859 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 MED23Q9ULK4 1368 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 PFDN6O15212 129 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 CTSWP56202 376 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
RNF40-201ENST00000324685 POLR2FP61218 127 aaKnown RBP23.05■■□□□ 1.28
RNF40-201ENST00000324685 DBN1Q16643 649 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 CSRNP1Q96S65 589 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 PCDHA12Q9UN75 941 aa23.05■■□□□ 1.28
RNF40-201ENST00000324685 H2AFZP0C0S5 128 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 H2AFVQ71UI9 128 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 MRPL11Q9Y3B7 192 aaKnown RBP23.04■■□□□ 1.28
RNF40-201ENST00000324685 COL4A3BPQ9Y5P4 624 aa23.04■■□□□ 1.28
RNF40-201ENST00000324685 RBBP5Q15291 538 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms