RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 RIMS2Q9UQ26 1411 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 IDI1Q13907 227 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 C20orf194Q5TEA3 1177 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 IGSF22Q8N9C0 903 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ST13P5Q8NFI4 369 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 TRIM58Q8NG06 486 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 PUM3Q15397 648 aaKnown RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 GDPD2Q9HCC8 539 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF277Q9NRM2 450 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-201ENST00000322507 TNNC2P02585 160 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 TUBGCP3Q96CW5 907 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 RAD21L1Q9H4I0 556 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 STK38LQ9Y2H1 464 aa10.64□□□□□ -0.71
COL12A1-201ENST00000322507 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 SFSWAPQ12872 951 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 HDDC2Q7Z4H3 204 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 WBP11Q9Y2W2 641 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF354CQ86Y25 554 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 PRPF38AQ8NAV1 312 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 ZC3H12CQ9C0D7 883 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 DISC1Q9NRI5 854 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 PFDN6O15212 129 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 PPP4R1Q8TF05 950 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 MCM9Q9NXL9 1143 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF148Q9UQR1 794 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 SYNMO15061 1565 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 RHOXF2BP0C7M4 288 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 MAML3Q96JK9 1138 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 RHOXF2Q9BQY4 288 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 POLR3CQ9BUI4 534 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 STX1BP61266 288 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 APBA1Q02410 837 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 NOC4LQ9BVI4 516 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 ZSWIM4Q9H7M6 989 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 GRK7Q8WTQ7 553 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 TCP11Q8WWU5 503 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 DEAF1O75398 565 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 MAN1A1P33908 653 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 TBC1D22AQ8WUA7 517 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 C17orf50Q8WW18 174 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 SPOPO43791 374 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 NBNO60934 754 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 TMCC1O94876 653 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 ZNF445P59923 1031 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 GOLGA8FQ08AF8 430 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 GOLGA8DPQ0D2H9 430 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 TAF11Q15544 211 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 NSMCE1Q8WV22 266 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 MCF2P10911 925 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 IL2RBP14784 551 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 RECQLP46063 649 aaPredicted RBP10.63□□□□□ -0.71
COL12A1-201ENST00000322507 KCNH3Q9ULD8 1083 aa10.63□□□□□ -0.71
COL12A1-201ENST00000322507 CLTAP09496 248 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 GPTP24298 496 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 STRN3Q13033 797 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 AK2P54819 239 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 TRAF7Q6Q0C0 670 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 IFNKQ9P0W0 207 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 JDP2Q8WYK2 163 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 SOS2Q07890 1332 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 LOC102724159A0A0B4J2E5 919 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 PWP2Q15269 919 aaKnown RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 TEX9Q8N6V9 391 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 LEO1Q8WVC0 666 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 RTEL1Q9NZ71 1219 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 FOXO3O43524 673 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 MARCKSP29966 332 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 CEP85Q6P2H3 762 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 ENOX1Q8TC92 643 aaKnown RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 XAGE3Q8WTP9 111 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 GOLGA8RI6L899 631 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 PIP4K2CQ8TBX8 421 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 VTI1AQ96AJ9 217 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 CHUKO15111 745 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 THAP12O43422 761 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 PYGLP06737 847 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 NFRKBQ6P4R8 1299 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 TEX11Q8IYF3 940 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 MYH9P35579 1960 aaKnown RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 KDM2BQ8NHM5 1336 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 GOLGA8IPA6NC78 632 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 KRT25Q7Z3Z0 450 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 CAB39Q9Y376 341 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 TAF12Q16514 161 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
COL12A1-201ENST00000322507 TYW1Q9NV66 732 aaKnown RBP10.62□□□□□ -0.71
COL12A1-201ENST00000322507 EVCP57679 992 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 ADCY3O60266 1144 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
COL12A1-201ENST00000322507 PAK1Q13153 545 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms