RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 KRT25Q7Z3Z0 450 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 EPC1Q9H2F5 836 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 A0A0G2JLW4 131 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 TNNC1P63316 161 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 WHAMMP3Q1A5X7 153 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 TTC31Q49AM3 519 aaPredicted RBP17.12■□□□□ 0.33
GCFC2-201ENST00000321027 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 PARD6BQ9BYG5 372 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 SYNCQ9H7C4 482 aa17.12■□□□□ 0.33
GCFC2-201ENST00000321027 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 H7C1D1 291 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 CDC27P30260 824 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 KLHL7Q8IXQ5 586 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 NOX5Q96PH1 765 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 PHLPP2Q6ZVD8 1323 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 PPP1R2P41236 205 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 LIFRP42702 1097 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 FOXO4P98177 505 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 CCDC25Q86WR0 208 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 DDX41Q9UJV9 622 aaKnown RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 H0YIN7 160 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 GTF2A1P52655 376 aaPredicted RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 CALCRLQ16602 461 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 PTPROQ16827 1216 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 MB21D2Q8IYB1 491 aaPredicted RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 PPP1R14CQ8TAE6 165 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 QTRT2Q9H974 415 aaKnown RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
GCFC2-201ENST00000321027 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
GCFC2-201ENST00000321027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 VGLL3A8MV65 326 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 FOXN1O15353 648 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 FAM13AO94988 1023 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 JDP2Q8WYK2 163 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 TRIM31Q9BZY9 425 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 PNMA6AP0CW24 399 aaPredicted RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 DNM2P50570 870 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 TRAF1Q13077 416 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 CCDC84Q86UT8 332 aaPredicted RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 HAUS4Q9H6D7 363 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 NF2P35240 595 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 UBLCP1Q8WVY7 318 aaPredicted RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 ZNF609O15014 1411 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
GCFC2-201ENST00000321027 SALL3Q9BXA9 1300 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 KCNQ2O43526 872 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 TRIM37O94972 964 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
GCFC2-201ENST00000321027 CETN3O15182 167 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 OSBPL5Q9H0X9 879 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 STK32BQ9NY57 414 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 TRPC5Q9UL62 973 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 EXOSC10Q01780 885 aaKnown RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 ARMCX5Q6P1M9 558 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 ATG9AQ7Z3C6 839 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 USP37Q86T82 979 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 CCDC97Q96F63 343 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
GCFC2-201ENST00000321027 NEDD4P46934 1319 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 B4DLN1 442 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 CPLX4Q7Z7G2 160 aa17.09■□□□□ 0.33
GCFC2-201ENST00000321027 DOK7Q18PE1 504 aa17.08■□□□□ 0.33
GCFC2-201ENST00000321027 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.33
GCFC2-201ENST00000321027 CEP104O60308 925 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 GYS2P54840 703 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 SP4Q02446 784 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 KLHL30Q0D2K2 578 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 PDIA6Q15084 440 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 RESP18Q5W5W9 173 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 MAP2P11137 1827 aaKnown RBP17.08■□□□□ 0.32
GCFC2-201ENST00000321027 CCDC77Q9BR77 488 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 USP40Q9NVE5 1235 aa17.08■□□□□ 0.32
GCFC2-201ENST00000321027 CHMP2AO43633 222 aa17.07■□□□□ 0.32
GCFC2-201ENST00000321027 BUB1O43683 1085 aa17.07■□□□□ 0.32
GCFC2-201ENST00000321027 PTPREP23469 700 aa17.07■□□□□ 0.32
GCFC2-201ENST00000321027 SCNN1DP51172 638 aa17.07■□□□□ 0.32
GCFC2-201ENST00000321027 ADCY7P51828 1080 aa17.07■□□□□ 0.32
GCFC2-201ENST00000321027 SF3A3Q12874 501 aaKnown RBP eCLIP17.07■□□□□ 0.32
GCFC2-201ENST00000321027 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
GCFC2-201ENST00000321027 SHC4Q6S5L8 630 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms