RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 PPP1R7Q15435 360 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 HIBCHQ6NVY1 386 aaPredicted RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 TSEN2Q8NCE0 465 aaKnown RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 EPN3Q9H201 632 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 SERTAD1Q9UHV2 236 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 RTN2O75298 545 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 RWDD2BP57060 319 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 FOXO4P98177 505 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 CAPRIN2Q6IMN6 1127 aaKnown RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 ENOX1Q8TC92 643 aaKnown RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 TCP11Q8WWU5 503 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 MARF1Q9Y4F3 1742 aaKnown RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 GRIK3Q13003 919 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 THEMIS2Q5TEJ8 643 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 MYCBPAPQ8TBZ2 947 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 IFT81Q8WYA0 676 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 STAMBPL1Q96FJ0 436 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 CHP1Q99653 195 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 ALG1Q9BT22 464 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 ATP6V0A4Q9HBG4 840 aa16.73■□□□□ 0.27
SCAP-202ENST00000320017 DMGDHQ9UI17 866 aaKnown RBP16.73■□□□□ 0.27
SCAP-202ENST00000320017 CPDO75976 1380 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 EYA2O00167 538 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 PPP1R37O75864 691 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 NR1D1P20393 614 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 KIF23Q02241 960 aaPredicted RBP16.72■□□□□ 0.27
SCAP-202ENST00000320017 IQCEQ6IPM2 695 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 MLKLQ8NB16 471 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
SCAP-202ENST00000320017 SNUPNO95149 360 aaKnown RBP16.72■□□□□ 0.27
SCAP-202ENST00000320017 GYPCP04921 128 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 CLTAP09496 248 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 ZNF18P17022 549 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 GUCY2FP51841 1108 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 EXOSC10Q01780 885 aaKnown RBP16.72■□□□□ 0.27
SCAP-202ENST00000320017 METTL24Q5JXM2 366 aa16.72■□□□□ 0.27
SCAP-202ENST00000320017 HLFQ16534 295 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 G3BP2Q9UN86 482 aaKnown RBP16.71■□□□□ 0.27
SCAP-202ENST00000320017 GPAA1O43292 621 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 FAM228AQ86W67 206 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 RASSF8Q8NHQ8 419 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 LRRC1Q9BTT6 524 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 TAB2Q9NYJ8 693 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 SMARCAL1Q9NZC9 954 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
SCAP-202ENST00000320017 A0A1B0GTH6 734 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 PDE2AO00408 941 aaPredicted RBP16.71■□□□□ 0.27
SCAP-202ENST00000320017 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
SCAP-202ENST00000320017 ZIM3Q96PE6 472 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 MYO1AQ9UBC5 1043 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 KCNJ14Q9UNX9 436 aa16.71■□□□□ 0.27
SCAP-202ENST00000320017 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 KCNQ2O43526 872 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 CASP1P29466 404 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 PTGISQ16647 500 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 SLC26A6Q9BXS9 759 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 UTYO14607 1347 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
SCAP-202ENST00000320017 UPP2O95045 317 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
SCAP-202ENST00000320017 FAM167BQ9BTA0 163 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 TRIM29Q14134 588 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 HELLSQ9NRZ9 838 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
SCAP-202ENST00000320017 TOM1O60784 492 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 CXCR5P32302 372 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 SPRED3Q2MJR0 410 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
SCAP-202ENST00000320017 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 ACTR5Q9H9F9 607 aaPredicted RBP16.69■□□□□ 0.26
SCAP-202ENST00000320017 A6NNZ2 444 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■□ 20.8
SCAP-202ENST00000320017 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 TUBB8Q3ZCM7 444 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
SCAP-202ENST00000320017 STAMQ92783 540 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 L3MBTL1Q9Y468 752 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
SCAP-202ENST00000320017 GOLGA6L10A6NI86 522 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 NDUFA10O95299 355 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 EHBP1Q8NDI1 1231 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 CYFIP2Q96F07 1278 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 ESYT3A0FGR9 886 aa16.68■□□□□ 0.26
SCAP-202ENST00000320017 SKOR1P84550 965 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms