RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 GSTTP1A0A1W2PQM5 241 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TSPY2A6NKD2 308 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TMEM110-MUSTN1A8MSY1 372 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 EYA2O00167 538 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CEP104O60308 925 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TUBBP07437 444 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 KRT13P13646 458 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CYP7A1P22680 504 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 KRT2P35908 639 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 GRIN1Q05586 938 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 SPATA1Q5VX52 437 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 CCDC170Q8IYT3 715 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 METTL22Q9BUU2 404 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 VEZTQ9HBM0 779 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TCP11L1Q9NUJ3 509 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TCHHQ07283 1943 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 PALLDQ8WX93 1383 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 ERVV-2B6SEH9 535 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 COPB1P53618 953 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 R3HDM1Q15032 1099 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 LRRC31Q6UY01 552 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 SYNE4Q8N205 404 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TC2NQ8N9U0 490 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 APPBP2Q92624 585 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 RSRC1Q96IZ7 334 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 DSCC1Q9BVC3 393 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
CDHR3-201ENST00000317716 DPH5Q9H2P9 285 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 TBC1D7Q9P0N9 293 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 DENND2AQ9ULE3 1009 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 RGPD5Q99666 1765 aa8.39□□□□□ -1.07
CDHR3-201ENST00000317716 LRP6O75581 1613 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 XIRP1Q702N8 1843 aaKnown RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 LRRIQ3A6PVS8 624 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ATP1A1P05023 1023 aaKnown RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ZFYP08048 801 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 FXR1P51114 621 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 PDE4DQ08499 809 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 NNTQ13423 1086 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 TXNRD1Q16881 649 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 FCHSD1Q86WN1 690 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 AMOTL1Q8IY63 956 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ENGASEQ8NFI3 743 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 MRRFQ96E11 262 aaKnown RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 MMS19Q96T76 1030 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 EPB41L5Q9HCM4 733 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 CD248Q9HCU0 757 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 THRAP3Q9Y2W1 955 aaKnown RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ZNF532Q9HCE3 1301 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 MFAP3LO75121 409 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 MOCS3O95396 460 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 GUCY2CP25092 1073 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 GUCY1A3Q02108 690 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ADCY1Q08828 1119 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 MUM1L1Q5H9M0 696 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 TRAPPC3LQ5T215 181 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 APOA5Q6Q788 366 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 KCNK9Q9NPC2 374 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 LRWD1Q9UFC0 647 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 GDAQ9Y2T3 454 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ANKRD18BA2A2Z9 1011 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 SNAP23O00161 211 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 NCK2O43639 380 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 CDC27P30260 824 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 ARHGAP25P42331 645 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 TTC38Q5R3I4 469 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 USPL1Q5W0Q7 1092 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 TRIM65Q6PJ69 517 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 KRT26Q7Z3Y9 468 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 PRPF38AQ8NAV1 312 aaKnown RBP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 KRT12Q99456 494 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDHR3-201ENST00000317716 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 NFU1Q9UMS0 254 aa8.38□□□□□ -1.07
CDHR3-201ENST00000317716 SALL3Q9BXA9 1300 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 NDUFA10O95299 355 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 FTCDO95954 541 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 KRT31Q15323 416 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 TMX4Q9H1E5 349 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 RMND1Q9NWS8 449 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 RGS17Q9UGC6 210 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 CLGNO14967 610 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 FDPSP14324 419 aaKnown RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 SEC24CP53992 1094 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 RASSF7Q02833 373 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 EHHADHQ08426 723 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 ITPK1Q13572 414 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 LETM2Q2VYF4 491 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 BEND6Q5SZJ8 279 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms