RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CASZ1Q86V15 1759 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ARHGEF28Q8N1W1 1705 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 TDRD6O60522 2096 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 MEFVO15553 781 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 PFDN1O60925 122 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ZWINTO95229 277 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 TNIP1Q15025 636 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 KRT24Q2M2I5 525 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 MAP7D1Q3KQU3 841 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CRELD2Q6UXH1 353 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 LRIG3Q6UXM1 1119 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 MIER3Q7Z3K6 550 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 MCF2L2Q86YR7 1114 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NEUROD6Q96NK8 337 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 POLEQ07864 2286 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 RGS16O15492 202 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 PFKFB2O60825 505 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NR1I2O75469 434 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 DEXIO95424 95 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CTNNA1P35221 906 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CCT6AP40227 531 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 PDCD7Q8N8D1 485 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 RAPGEF4Q8WZA2 1011 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 TEX13AQ9BXU3 409 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 XPO4Q9C0E2 1151 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NRDE2Q9H7Z3 1164 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 MMRN2Q9H8L6 949 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 TPX2Q9ULW0 747 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 SUFUQ9UMX1 484 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NCAPD2Q15021 1401 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ATP10DQ9P241 1426 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 RHOXF2BP0C7M4 288 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 HSPA8P11142 646 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 H2AFXP16104 143 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NR1D1P20393 614 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 GNA11P29992 359 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 PHBP35232 272 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 RAB15P59190 212 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 PAK1Q13153 545 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CUL3Q13618 768 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 KMT5BQ4FZB7 885 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 FAM173BQ6P4H8 233 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 RHOXF2Q9BQY4 288 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 GOPCQ9HD26 462 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 LZTFL1Q9NQ48 299 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 MRFAP1Q9Y605 127 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NOTCH3Q9UM47 2321 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 PLEKHG2Q9H7P9 1386 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 SASH1O94885 1247 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ABCD1P33897 745 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 IL15P40933 162 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 SMTNP53814 917 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ESRRGP62508 458 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 KPNB1Q14974 876 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NYAP1Q6ZVC0 841 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ZNF579Q8NAF0 562 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ESR2Q92731 530 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 TRIOBPQ9H2D6 2365 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 SLC17A8Q8NDX2 589 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 COG1Q8WTW3 980 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 NRBF2Q96F24 287 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 DDX23Q9BUQ8 820 aaKnown RBP4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CCDC113Q9H0I3 377 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 KLC4Q9NSK0 619 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 ZNF148Q9UQR1 794 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CDC42BPGQ6DT37 1551 aa4.97□□□□□ -1.61
CNOT1-201ENST00000317147 CPP00450 1065 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 PDE4BQ07343 736 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 ADRM1Q16186 407 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 SYCP2LQ5T4T6 812 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 PPP1R42Q7Z4L9 355 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 VSIG1Q86XK7 387 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 ENAHQ8N8S7 591 aaPredicted RBP4.96□□□□□ -1.61
CNOT1-201ENST00000317147 FOXP3Q9BZS1 431 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 BOLA2Q9H3K6 86 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 NFE2L3Q9Y4A8 694 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 FAM169AQ9Y6X4 670 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 RPAP1Q9BWH6 1393 aaPredicted RBP4.96□□□□□ -1.61
CNOT1-201ENST00000317147 LTN1O94822 1766 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 DLC1Q96QB1 1528 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 PTPDC1A2A3K4 754 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 RNF8O76064 485 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 IL9RQ01113 521 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 STRN3Q13033 797 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 NRBP1Q9UHY1 535 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 RCOR1Q9UKL0 485 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 POGZQ7Z3K3 1410 aa4.96□□□□□ -1.61
CNOT1-201ENST00000317147 TAF1P21675 1872 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 SERPINB4P48594 390 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 SPATA1Q5VX52 437 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 PNMA8AQ86V59 439 aaPredicted RBP4.96□□□□□ -1.62
CNOT1-201ENST00000317147 ATP2A3Q93084 1043 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 EDEM3Q9BZQ6 932 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 CTNNAL1Q9UBT7 734 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 MTMR6Q9Y217 621 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 KIF13AQ9H1H9 1805 aa4.96□□□□□ -1.62
CNOT1-201ENST00000317147 ANKRD36A6QL64 1941 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms