RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 CATSPERGQ6ZRH7 1159 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 ZNF654Q8IZM8 581 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 CHURC1Q8WUH1 139 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 FEM1BQ9UK73 627 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 ATP6V1DQ9Y5K8 247 aa17.9■□□□□ 0.46
HNF4A-202ENST00000316673 GOLGA6L22H0YM25 854 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.45
HNF4A-202ENST00000316673 SCRN1Q12765 414 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 TROAPQ12815 778 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 COL9A3Q14050 684 aaPredicted RBP17.89■□□□□ 0.45
HNF4A-202ENST00000316673 COG2Q14746 738 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 CCDC96Q2M329 555 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 FAM83BQ5T0W9 1011 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 FAM160B2Q86V87 743 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 SAGE1Q9NXZ1 904 aa17.89■□□□□ 0.45
HNF4A-202ENST00000316673 GOLGA8AA7E2F4 631 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 FLOT1O75955 427 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 FDX1P10109 184 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 STAT2P52630 851 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 DGKZQ13574 1117 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 TAF1CQ15572 869 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 PRPF38AQ8NAV1 312 aaKnown RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 CFHR5Q9BXR6 569 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 ASCC2Q9H1I8 757 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 RBM28Q9NW13 759 aaKnown RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 NID2Q14112 1375 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 TMEM232C9JQI7 657 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 GCLCP48506 637 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 GNAQP50148 359 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 CCT2P78371 535 aaKnown RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 MB21D1Q8N884 522 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 SMCR8Q8TEV9 937 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 SENP2Q9HC62 589 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 GPHNQ9NQX3 736 aaPredicted RBP17.88■□□□□ 0.45
HNF4A-202ENST00000316673 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
HNF4A-202ENST00000316673 STX6O43752 255 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 IKQ13123 557 aaPredicted RBP17.87■□□□□ 0.45
HNF4A-202ENST00000316673 GRM4Q14833 912 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 RTN1Q16799 776 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
HNF4A-202ENST00000316673 BTNL9Q6UXG8 535 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 MICU3Q86XE3 530 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 SMARCC2Q8TAQ2 1214 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 NUP133Q8WUM0 1156 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 WASF1Q92558 559 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 NUP88Q99567 741 aaPredicted RBP17.87■□□□□ 0.45
HNF4A-202ENST00000316673 SLF1Q9BQI6 1058 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 LZTS2Q9BRK4 669 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 BRPF3Q9ULD4 1205 aa17.87■□□□□ 0.45
HNF4A-202ENST00000316673 FOXN1O15353 648 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 HERVK_113P62684 666 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 KCTD1Q719H9 257 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 RNF186Q9NXI6 227 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 PPP1R9AQ9ULJ8 1098 aa17.86■□□□□ 0.45
HNF4A-202ENST00000316673 MYH6P13533 1939 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 PTPDC1A2A3K4 754 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 PALM3A6NDB9 673 aaPredicted RBP17.85■□□□□ 0.45
HNF4A-202ENST00000316673 H3BQV1 296 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 TLR2O60603 784 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 SMARCA1P28370 1054 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 DSG3P32926 999 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 FANCBQ8NB91 859 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
HNF4A-202ENST00000316673 P2RX7Q99572 595 aaKnown RBP17.85■□□□□ 0.45
HNF4A-202ENST00000316673 WBP1LQ9NX94 342 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 PNMA2Q9UL42 364 aa17.85■□□□□ 0.45
HNF4A-202ENST00000316673 KLRF2D3W0D1 207 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 TRPA1O75762 1119 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 BRD1O95696 1058 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 CYP2C8P10632 490 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 CTCFP49711 727 aaPredicted RBP17.84■□□□□ 0.45
HNF4A-202ENST00000316673 GPCPD1Q9NPB8 672 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 MAD2L2Q9UI95 211 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 HPS5Q9UPZ3 1129 aa17.84■□□□□ 0.45
HNF4A-202ENST00000316673 CTDP1Q9Y5B0 961 aaPredicted RBP17.84■□□□□ 0.45
HNF4A-202ENST00000316673 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.45
HNF4A-202ENST00000316673 SPDYE16A6NNV3 312 aaPredicted RBP17.83■□□□□ 0.45
HNF4A-202ENST00000316673 DDX11L8A8MPP1 907 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 SYT1P21579 422 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 AKAP17AQ02040 695 aaKnown RBP17.83■□□□□ 0.45
HNF4A-202ENST00000316673 ST3GAL1Q11201 340 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 CRHR2Q13324 411 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 NOM1Q5C9Z4 860 aaKnown RBP17.83■□□□□ 0.45
HNF4A-202ENST00000316673 TNPO1Q92973 898 aaKnown RBP17.83■□□□□ 0.45
HNF4A-202ENST00000316673 KIFC2Q96AC6 838 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 MYL10Q9BUA6 226 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.45
HNF4A-202ENST00000316673 ADAMTS5Q9UNA0 930 aa17.83■□□□□ 0.45
HNF4A-202ENST00000316673 RABGAP1Q9Y3P9 1069 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms