RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 WFDC12Q8WWY7 111 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 EZH1Q92800 747 aaPredicted RBP5.59□□□□□ -1.51
SMCO3-201ENST00000316048 Q96M66 194 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 TRIM39Q9HCM9 518 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 NDOR1Q9UHB4 597 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 SFMBT1Q9UHJ3 866 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
SMCO3-201ENST00000316048 SHISA3A0PJX4 238 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 KCNQ2O43526 872 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 RFPL3O75679 317 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 RNF4P78317 190 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 FAM50AQ14320 339 aaKnown RBP5.59□□□□□ -1.52
SMCO3-201ENST00000316048 NOL9Q5SY16 702 aaKnown RBP5.59□□□□□ -1.52
SMCO3-201ENST00000316048 TREML4Q6UXN2 200 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 STRA8Q7Z7C7 330 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 LRRTM3Q86VH5 581 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 TMEM145Q8NBT3 493 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 CHAC2Q8WUX2 184 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 MCMBPQ9BTE3 642 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 CEP41Q9BYV8 373 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 TPX2Q9ULW0 747 aaKnown RBP5.59□□□□□ -1.52
SMCO3-201ENST00000316048 G3BP2Q9UN86 482 aaKnown RBP5.59□□□□□ -1.52
SMCO3-201ENST00000316048 ATP8A1Q9Y2Q0 1164 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 PEG3Q9GZU2 1588 aa5.59□□□□□ -1.52
SMCO3-201ENST00000316048 PRR33A8MZF0 331 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 H0Y8X5 98 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 NOP56O00567 594 aaKnown RBP5.58□□□□□ -1.52
SMCO3-201ENST00000316048 SPATA31C1P0DKV0 1188 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 GFRA1P56159 465 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 SUMO1P63165 101 aaKnown RBP5.58□□□□□ -1.52
SMCO3-201ENST00000316048 MBTPS1Q14703 1052 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 DPY19L1Q2PZI1 675 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 FNDC3BQ53EP0 1204 aaKnown RBP5.58□□□□□ -1.52
SMCO3-201ENST00000316048 SHISA5Q8N114 240 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 UTP4Q969X6 686 aaKnown RBP5.58□□□□□ -1.52
SMCO3-201ENST00000316048 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
SMCO3-201ENST00000316048 FBXL18Q96ME1 805 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 IPO9Q96P70 1041 aaKnown RBP5.58□□□□□ -1.52
SMCO3-201ENST00000316048 DUSP23Q9BVJ7 150 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 ASPNQ9BXN1 380 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 TRAF6Q9Y4K3 522 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 CCDC88BA6NC98 1476 aa5.58□□□□□ -1.52
SMCO3-201ENST00000316048 CCDC163A0A0D9SF12 145 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 PDGFRBP09619 1106 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 MAP4P27816 1152 aaKnown RBP5.57□□□□□ -1.52
SMCO3-201ENST00000316048 ETV3P41162 512 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 DENND5AQ6IQ26 1287 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 GPAT2Q6NUI2 795 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 DDX42Q86XP3 938 aaKnown RBP eCLIP5.57□□□□□ -1.52
SMCO3-201ENST00000316048 C1orf159Q96HA4 380 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 SCLYQ96I15 445 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 MYRFLQ96LU7 910 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 MRPL4Q9BYD3 311 aaKnown RBP5.57□□□□□ -1.52
SMCO3-201ENST00000316048 NOP53Q9NZM5 478 aaKnown RBP5.57□□□□□ -1.52
SMCO3-201ENST00000316048 FHOD1Q9Y613 1164 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 ASXL2Q76L83 1435 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 SMARCA2P51531 1590 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 PRAMEF1O95521 474 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 CTSKP43235 329 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 NKX2-4Q9H2Z4 354 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 CAAP1Q9H8G2 361 aa5.57□□□□□ -1.52
SMCO3-201ENST00000316048 TNPO3Q9Y5L0 923 aaKnown RBP5.57□□□□□ -1.52
SMCO3-201ENST00000316048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 RASGRP1O95267 797 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 CBX7O95931 251 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 SNRPB2P08579 225 aaKnown RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 FAM87AP0C7U9 286 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 ECI1P42126 302 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 KCNJ6P48051 423 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 NFKB2Q00653 900 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 NRG1Q02297 640 aaPredicted RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 NFKBIBQ15653 356 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 TRIM61Q5EBN2 209 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 CT47A1Q5JQC4 288 aaPredicted RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 CRTC3Q6UUV7 619 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 FAM20CQ8IXL6 584 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 RAVER1Q8IY67 606 aaKnown RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 DTWD2Q8NBA8 298 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 SYTL5Q8TDW5 730 aaPredicted RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 KCNF1Q9H3M0 494 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 U3KQE9 123 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 ATAD2BQ9ULI0 1458 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 FAM95CA0A1B0GW59 222 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 STXBP3O00186 592 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 ADGRE1Q14246 886 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 PCBP1Q15365 356 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 POMZP3Q6PJE2 187 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 LHFPL2Q6ZUX7 228 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 FERMT3Q86UX7 667 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 DZIP1LQ8IYY4 767 aaKnown RBP5.56□□□□□ -1.52
SMCO3-201ENST00000316048 AFAP1L2Q8N4X5 818 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 GSTCDQ8NEC7 633 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 DSCC1Q9BVC3 393 aa5.56□□□□□ -1.52
SMCO3-201ENST00000316048 ADMP35318 185 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 MAP7Q14244 749 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 SEPT7Q16181 437 aaKnown RBP5.55□□□□□ -1.52
SMCO3-201ENST00000316048 PKN3Q6P5Z2 889 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 KCNT2Q6UVM3 1135 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 PODNQ7Z5L7 613 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms