RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ILDR2Q71H61 639 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 OSBPL5Q9H0X9 879 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 DNAJC18Q9H819 358 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 TMEM260Q9NX78 707 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 STK36Q9NRP7 1315 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 POLR3GO15318 223 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 BAG6P46379 1132 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 JAG1P78504 1218 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 R3HDM1Q15032 1099 aaKnown RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 CCDC96Q2M329 555 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 ATL3Q6DD88 541 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 METTL16Q86W50 562 aaKnown RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 CREBRFQ8IUR6 639 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 SMYD4Q8IYR2 804 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 TTLL6Q8N841 843 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 C7orf43Q8WVR3 580 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 CNKSR1Q969H4 720 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 EEF2KMTQ96G04 330 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 ZNF446Q9NWS9 450 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 MTMR4Q9NYA4 1195 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 FAM198AQ9UFP1 575 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 FBXO2Q9UK22 296 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 PCDHA5Q9Y5H7 936 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 A0A1W2PQ27 194 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 A0A1W2PQ64 194 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 A0A1W2PQD8 194 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 PCP11498 1178 aaKnown RBP8.65□□□□□ -1.02
TRIM55-202ENST00000315962 SHMT1P34896 483 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 NAPAP54920 295 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 CFAP100Q494V2 611 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 RBM43Q6ZSC3 357 aaKnown RBP8.65□□□□□ -1.02
TRIM55-202ENST00000315962 CCAR2Q8N163 923 aaKnown RBP8.65□□□□□ -1.02
TRIM55-202ENST00000315962 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
TRIM55-202ENST00000315962 FAM163AQ96GL9 167 aaPredicted RBP8.65□□□□□ -1.02
TRIM55-202ENST00000315962 BLZF1Q9H2G9 400 aa8.65□□□□□ -1.02
TRIM55-202ENST00000315962 PSMD14O00487 310 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 SEC31AO94979 1220 aaKnown RBP8.65□□□□□ -1.03
TRIM55-202ENST00000315962 EGFRP00533 1210 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 SLFN14P0C7P3 912 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 KCNA3P22001 575 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 DHX8Q14562 1220 aaKnown RBP8.65□□□□□ -1.03
TRIM55-202ENST00000315962 IL17AQ16552 155 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 LETM2Q2VYF4 491 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 TTC38Q5R3I4 469 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 E4F1Q66K89 784 aaPredicted RBP8.65□□□□□ -1.03
TRIM55-202ENST00000315962 KLHL10Q6JEL2 608 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 ARMCX5Q6P1M9 558 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.03
TRIM55-202ENST00000315962 JMYQ8N9B5 988 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 ZNF287Q9HBT7 754 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 BRMS1Q9HCU9 246 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 FZD1Q9UP38 647 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 MAPK8IP1Q9UQF2 711 aa8.65□□□□□ -1.03
TRIM55-202ENST00000315962 PDHBP11177 359 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 IKQ13123 557 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-202ENST00000315962 SEPT2Q15019 361 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 STRIP1Q5VSL9 837 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 RESP18Q5W5W9 173 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 TMC4Q7Z404 712 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 CEP57L1Q8IYX8 460 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 RASSF8Q8NHQ8 419 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 CCDC194A0A1B0GVG4 234 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 SMCO2A6NFE2 343 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 PPP6R2O75170 966 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 BMP6P22004 513 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 RRP1BQ14684 758 aaKnown RBP8.64□□□□□ -1.03
TRIM55-202ENST00000315962 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 DPF2Q92785 391 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 CSRNP1Q96S65 589 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 ZSWIM4Q9H7M6 989 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
TRIM55-202ENST00000315962 DNAI1Q9UI46 699 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 BCS1LQ9Y276 419 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 PAXBP1Q9Y5B6 917 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 A0A1B0GUL6 1792 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 PALM3A6NDB9 673 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
TRIM55-202ENST00000315962 PTPREP23469 700 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 GABPAQ06546 454 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 GRM4Q14833 912 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 UBE2SQ16763 222 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 CERKLQ49MI3 558 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-202ENST00000315962 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 STYK1Q6J9G0 422 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 PPP1R13BQ96KQ4 1090 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 TMEM39BQ9GZU3 492 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 TMEM60Q9H2L4 133 aa8.64□□□□□ -1.03
TRIM55-202ENST00000315962 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 CCNT1O60563 726 aaKnown RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 TOP1P11387 765 aaKnown RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 STX17P56962 302 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 NBPF9Q3BBW0 867 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 KRBA2Q6ZNG9 492 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms