RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CTR9Q6PD62 1173 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 WDR59Q6PJI9 974 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 SRBD1Q8N5C6 995 aaKnown RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 MB21D1Q8N884 522 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 DRC1Q96MC2 740 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 HAUS4Q9H6D7 363 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 ANKRD36CQ5JPF3 1778 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 NUP98P52948 1817 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 CNTNAP5Q8WYK1 1306 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 H7C1D1 291 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 RNF40O75150 1001 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 HERVK_113P62684 666 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 GDAP1L1Q96MZ0 367 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.1■□□□□ 0.01
SKA3-202ENST00000314759 PMS1P54277 932 aaKnown RBP15.1■□□□□ 0.01
SKA3-202ENST00000314759 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.1■□□□□ 0.01
SKA3-202ENST00000314759 BRINP3Q76B58 766 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 PYM1Q9BRP8 204 aaKnown RBP15.1■□□□□ 0.01
SKA3-202ENST00000314759 RIOK1Q9BRS2 568 aaKnown RBP15.1■□□□□ 0.01
SKA3-202ENST00000314759 RMND1Q9NWS8 449 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 LUC7L2Q9Y383 392 aaKnown RBP15.1■□□□□ 0.01
SKA3-202ENST00000314759 SAR1BQ9Y6B6 198 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 DISP2A7MBM2 1401 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 ZNF507Q8TCN5 953 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 ACBD3Q9H3P7 528 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 VIPAS39Q9H9C1 493 aa15.1■□□□□ 0.01
SKA3-202ENST00000314759 CALM1P0DP23 149 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 CALM2P0DP24 149 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 CALM3P0DP25 149 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 TRAPPC10P48553 1259 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 AARSP49588 968 aaKnown RBP eCLIP15.09■□□□□ 0.01
SKA3-202ENST00000314759 NLRP5P59047 1200 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 CCDC122Q5T0U0 273 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 PAPD7Q5XG87 772 aaKnown RBP15.09■□□□□ 0.01
SKA3-202ENST00000314759 ADSSL1Q8N142 457 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 LGALS16A8MUM7 142 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 DYNLL1P63167 89 aaKnown RBP15.09■□□□□ 0.01
SKA3-202ENST00000314759 CAPN11Q9UMQ6 739 aa15.09■□□□□ 0.01
SKA3-202ENST00000314759 STRCP1A6NGW2 1772 aa15.08■□□□□ 0.01
SKA3-202ENST00000314759 A0A1W2PQC6 194 aa15.08■□□□□ 0
SKA3-202ENST00000314759 PES1O00541 588 aaKnown RBP15.08■□□□□ 0
SKA3-202ENST00000314759 NMT2O60551 498 aa15.08■□□□□ 0
SKA3-202ENST00000314759 DDAH1O94760 285 aa15.08■□□□□ 0
SKA3-202ENST00000314759 GUCY2CP25092 1073 aa15.08■□□□□ 0
SKA3-202ENST00000314759 C4orf32Q8N8J7 132 aa15.08■□□□□ 0
SKA3-202ENST00000314759 PPM1EQ8WY54 764 aa15.08■□□□□ 0
SKA3-202ENST00000314759 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
SKA3-202ENST00000314759 PRPF6O94906 941 aaKnown RBP15.08■□□□□ 0
SKA3-202ENST00000314759 FGRP09769 529 aa15.08■□□□□ 0
SKA3-202ENST00000314759 SCG2P13521 617 aa15.08■□□□□ 0
SKA3-202ENST00000314759 EVX2Q03828 476 aa15.08■□□□□ 0
SKA3-202ENST00000314759 CHRNDQ07001 517 aa15.08■□□□□ 0
SKA3-202ENST00000314759 CAPZA3Q96KX2 299 aa15.08■□□□□ 0
SKA3-202ENST00000314759 HPCAL4Q9UM19 191 aa15.08■□□□□ 0
SKA3-202ENST00000314759 DUOX1Q9NRD9 1551 aa15.07■□□□□ 0
SKA3-202ENST00000314759 PPFIA4O75335 1185 aa15.07■□□□□ 0
SKA3-202ENST00000314759 ZMYND10O75800 440 aa15.07■□□□□ 0
SKA3-202ENST00000314759 IL6STP40189 918 aaPredicted RBP15.07■□□□□ 0
SKA3-202ENST00000314759 STAT6P42226 847 aa15.07■□□□□ 0
SKA3-202ENST00000314759 RCCD1A6NED2 376 aa15.07■□□□□ 0
SKA3-202ENST00000314759 LONP1P36776 959 aaKnown RBP15.07■□□□□ 0
SKA3-202ENST00000314759 IGHMBP2P38935 993 aaKnown RBP15.07■□□□□ 0
SKA3-202ENST00000314759 NAALADL2Q58DX5 795 aa15.07■□□□□ 0
SKA3-202ENST00000314759 ARL6IP4Q66PJ3 421 aaKnown RBP15.07■□□□□ 0
SKA3-202ENST00000314759 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
SKA3-202ENST00000314759 LACRTQ9GZZ8 138 aa15.07■□□□□ 0
SKA3-202ENST00000314759 YY1AP1Q9H869 796 aa15.07■□□□□ 0
SKA3-202ENST00000314759 LOC102724159A0A0B4J2E5 919 aa15.06■□□□□ 0
SKA3-202ENST00000314759 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
SKA3-202ENST00000314759 PWP2Q15269 919 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 TSR1Q2NL82 804 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 CTCFLQ8NI51 663 aaPredicted RBP15.06■□□□□ 0
SKA3-202ENST00000314759 COG1Q8WTW3 980 aa15.06■□□□□ 0
SKA3-202ENST00000314759 BRIP1Q9BX63 1249 aa15.06■□□□□ 0
SKA3-202ENST00000314759 AGPAT5Q9NUQ2 364 aa15.06■□□□□ 0
SKA3-202ENST00000314759 KAT6BQ8WYB5 2073 aa15.06■□□□□ 0
SKA3-202ENST00000314759 PDS5AQ29RF7 1337 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 TARSL2A2RTX5 802 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 MCM3P25205 808 aa15.06■□□□□ 0
SKA3-202ENST00000314759 EEF1GP26641 437 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 GYG1P46976 350 aa15.06■□□□□ 0
SKA3-202ENST00000314759 MEA1Q16626 185 aa15.06■□□□□ 0
SKA3-202ENST00000314759 PFKFB3Q16875 520 aaPredicted RBP15.06■□□□□ 0
SKA3-202ENST00000314759 GSPT2Q8IYD1 628 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 JAKMIP2Q96AA8 810 aa15.06■□□□□ 0
SKA3-202ENST00000314759 DISC1Q9NRI5 854 aa15.06■□□□□ 0
SKA3-202ENST00000314759 BAZ2AQ9UIF9 1905 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 MYH13Q9UKX3 1938 aa15.06■□□□□ 0
SKA3-202ENST00000314759 USP17L12C9JPN9 530 aa15.06■□□□□ 0
SKA3-202ENST00000314759 USP17L21D6R901 530 aa15.06■□□□□ 0
SKA3-202ENST00000314759 ZNF185O15231 689 aa15.06■□□□□ 0
SKA3-202ENST00000314759 MYBL2P10244 700 aa15.06■□□□□ 0
SKA3-202ENST00000314759 KRT83P78385 493 aa15.06■□□□□ 0
SKA3-202ENST00000314759 MAP9Q49MG5 647 aa15.06■□□□□ 0
SKA3-202ENST00000314759 CCDC152Q4G0S7 254 aa15.06■□□□□ 0
SKA3-202ENST00000314759 ZNF662Q6ZS27 426 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms