RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 ERVK-24P63145 666 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 FAAP100Q0VG06 881 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 CCDC183Q5T5S1 534 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 C16orf59Q7L2K0 433 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 MICALL1Q8N3F8 863 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 LINS1Q8NG48 757 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 SMCR8Q8TEV9 937 aaPredicted RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 NCAPGQ9BPX3 1015 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 RBPJLQ9UBG7 517 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 KCNG1Q9UIX4 513 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 ZNFX1Q9P2E3 1918 aaKnown RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 SPDYE4A6NLX3 237 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 ANXA1P04083 346 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 EIF2S2P20042 333 aaKnown RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 CHMLP26374 656 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 DSG3P32926 999 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 KCNJ4P48050 445 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 CCNA1P78396 465 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 AIMP1Q12904 312 aaKnown RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 LRRC41Q15345 812 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 TMEM57Q8N5G2 664 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 MRPL50Q8N5N7 158 aaKnown RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 SSH1Q8WYL5 1049 aa4.89□□□□□ -1.63
POLR2B-201ENST00000314595 ATXN2Q99700 1313 aaKnown RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 SENP6Q9GZR1 1112 aaPredicted RBP4.89□□□□□ -1.63
POLR2B-201ENST00000314595 NBL1P41271 181 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 MCM2P49736 904 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 CCDC30Q5VVM6 783 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 SH3BP5LQ7L8J4 393 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 PRSS33Q8NF86 280 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 NEK9Q8TD19 979 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 HLA-CQ95604 372 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 FAM161BQ96MY7 647 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 SNRKQ9NRH2 765 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 ZHX2Q9Y6X8 837 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 BDP1A6H8Y1 2624 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 GADD45BO75293 160 aaPredicted RBP4.88□□□□□ -1.63
POLR2B-201ENST00000314595 MYCP01106 439 aaPredicted RBP4.88□□□□□ -1.63
POLR2B-201ENST00000314595 COPB2P35606 906 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 HERVK_113P62684 666 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 RNF20Q5VTR2 975 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 ZNF467Q7Z7K2 595 aaPredicted RBP4.88□□□□□ -1.63
POLR2B-201ENST00000314595 CCDC146Q8IYE0 955 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 MAGEB6Q8N7X4 407 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 XAGE2Q96GT9 111 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 CENPFP49454 3210 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L5A8MUK1 530 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 MAP2K7O14733 419 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 CLGNO14967 610 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 FANCGO15287 622 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 DCXO43602 365 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 ADAMTS4O75173 837 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 PRPF40AO75400 957 aaKnown RBP4.88□□□□□ -1.63
POLR2B-201ENST00000314595 NEXNQ0ZGT2 675 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 TMEM199Q8N511 208 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 EDC3Q96F86 508 aaKnown RBP4.88□□□□□ -1.63
POLR2B-201ENST00000314595 TTC12Q9H892 705 aaPredicted RBP4.88□□□□□ -1.63
POLR2B-201ENST00000314595 FLRT1Q9NZU1 646 aa4.88□□□□□ -1.63
POLR2B-201ENST00000314595 SGSM2O43147 1006 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 CAP2P40123 477 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 BACE1P56817 501 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 CCZ1BP86790 482 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 CCZ1P86791 482 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 CHAF1AQ13111 956 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 ICE2Q659A1 982 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 GADL1Q6ZQY3 521 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 SRLQ86TD4 932 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 C17orf53Q8N3J3 647 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 SPRYD3Q8NCJ5 442 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 KHSRPQ92945 711 aaKnown RBP eCLIP4.87□□□□□ -1.632e-7■■■□□ 15.7
POLR2B-201ENST00000314595 SLC9A7Q96T83 725 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.87□□□□□ -1.638e-9■■■□□ 16.3
POLR2B-201ENST00000314595 ALDH8A1Q9H2A2 487 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 MED4Q9NPJ6 270 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 NEDD4P46934 1319 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 DCDC2CA8MYV0 355 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 IFIT5Q13325 482 aaKnown RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 EPHA10Q5JZY3 1008 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 ZSCAN25Q6NSZ9 544 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 CCDC129Q6ZRS4 1044 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 SH3RF1Q7Z6J0 888 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 SLF2Q8IX21 1173 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 FBXW7Q969H0 707 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 DONSONQ9NYP3 566 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 MAP3K2Q9Y2U5 619 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 GRXCR2A6NFK2 248 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 NCK2O43639 380 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 TUBB4AP04350 444 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 RBM5P52756 815 aaKnown RBP eCLIP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 CBX2Q14781 532 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 FAM43BQ6ZT52 329 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 MB21D1Q8N884 522 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 UPF3BQ9BZI7 483 aaKnown RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 TMX1Q9H3N1 280 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 PRDM12Q9H4Q4 367 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 ZSCAN16Q9H4T2 348 aaPredicted RBP4.87□□□□□ -1.63
POLR2B-201ENST00000314595 SLC5A4Q9NY91 659 aa4.87□□□□□ -1.63
POLR2B-201ENST00000314595 YBX2Q9Y2T7 364 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms