RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 SAMM50Q9Y512 469 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 PSMD14O00487 310 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 ZEB2O60315 1214 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 REXO2Q9Y3B8 237 aaKnown RBP12.48□□□□□ -0.41
PTPN7-201ENST00000309017 CYP2D7A0A087X1C5 515 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 TACC1O75410 805 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-201ENST00000309017 SLC7A5Q01650 507 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 NLRP10Q86W26 655 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-201ENST00000309017 HSF2BPO75031 334 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 EVA1CP58658 441 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 SLC4A8Q2Y0W8 1093 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 MYH8P13535 1937 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 MYBL2P10244 700 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-201ENST00000309017 PAFAH1B1P43034 410 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 HERVK_113P62684 666 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 GIGYF2Q6Y7W6 1299 aaKnown RBP12.47□□□□□ -0.41
PTPN7-201ENST00000309017 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-201ENST00000309017 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 LACRTQ9GZZ8 138 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 AGPAT5Q9NUQ2 364 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 DUSP10Q9Y6W6 482 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 SPEF2Q9C093 1822 aa12.47□□□□□ -0.41
PTPN7-201ENST00000309017 LGALS16A8MUM7 142 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 AKR1B10O60218 316 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 OPA1O60313 960 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 PDE8AO60658 829 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 INPP5BP32019 993 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 CXCR5P32302 372 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 EHD4Q9H223 541 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 NHEJ1Q9H9Q4 299 aaPredicted RBP12.46□□□□□ -0.41
PTPN7-201ENST00000309017 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 USP54Q70EL1 1684 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 AARSP49588 968 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTPN7-201ENST00000309017 DNM2P50570 870 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.41
PTPN7-201ENST00000309017 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.41
PTPN7-201ENST00000309017 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.41
PTPN7-201ENST00000309017 SMCR8Q8TEV9 937 aaPredicted RBP12.46□□□□□ -0.41
PTPN7-201ENST00000309017 TUBGCP2Q9BSJ2 902 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 CENPHQ9H3R5 247 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 FAM184BQ9ULE4 1060 aa12.46□□□□□ -0.41
PTPN7-201ENST00000309017 CCDC194A0A1B0GVG4 234 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 SMIM22K7EJ46 135 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.42
PTPN7-201ENST00000309017 ATP1A2P50993 1020 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 PPARDQ03181 441 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 PPFIA1Q13136 1202 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 PLA2G12BQ9BX93 195 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 EXOC1Q9NV70 894 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.42
PTPN7-201ENST00000309017 LRWD1Q9UFC0 647 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.42
PTPN7-201ENST00000309017 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 TARSL2A2RTX5 802 aaKnown RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 ERCC3P19447 782 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 IRAK1P51617 712 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 KCTD16Q68DU8 428 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 ZNF512BQ96KM6 892 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 NOC4LQ9BVI4 516 aaKnown RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 LRRC10BA6NIK2 292 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 PRPF6O94906 941 aaKnown RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 PKN1Q16512 942 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 KRT26Q7Z3Y9 468 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 RASGRP4Q8TDF6 673 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 ALS2CR12Q96Q35 445 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 POLD4Q9HCU8 107 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 USP8P40818 1118 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 KLK7P49862 253 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 MMS22LQ6ZRQ5 1243 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
PTPN7-201ENST00000309017 IFIH1Q9BYX4 1025 aaKnown RBP12.45□□□□□ -0.42
PTPN7-201ENST00000309017 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 PDE2AO00408 941 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 EEF1GP26641 437 aaKnown RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 PAPD7Q5XG87 772 aaKnown RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 MMRN2Q9H8L6 949 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 CAPN11Q9UMQ6 739 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms